Variant report

Variant	rs16933214
Chromosome Location	chr8:68168313-68168314
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:68167279..68170535-chr8:68180951..68183739,3	K562	blood:

Extended variants
information (count: 78 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:78)

rs_ID	r²[population]
rs10504399	0.83[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11557200	0.85[EUR][1000 genomes]
rs11986053	1.00[JPT][hapmap];0.85[EUR][1000 genomes]
rs11986982	1.00[JPT][hapmap];0.85[EUR][1000 genomes]
rs11988465	0.85[EUR][1000 genomes]
rs11997404	1.00[JPT][hapmap];0.85[EUR][1000 genomes]
rs16919053	1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16933139	0.85[EUR][1000 genomes]
rs16933147	0.85[EUR][1000 genomes]
rs16933160	1.00[JPT][hapmap];0.80[EUR][1000 genomes]
rs16933162	1.00[JPT][hapmap];0.85[EUR][1000 genomes]
rs16933170	1.00[JPT][hapmap];0.85[EUR][1000 genomes]
rs16933173	1.00[JPT][hapmap];0.85[EUR][1000 genomes]
rs16933182	1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16933190	1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16933204	1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1808140	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2168542	0.85[EUR][1000 genomes]
rs2290585	1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2290586	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2305672	1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2305673	1.00[JPT][hapmap];0.85[EUR][1000 genomes]
rs28640047	0.80[AFR][1000 genomes]
rs3780131	0.92[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4364616	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs55662680	0.85[EUR][1000 genomes]
rs55737416	0.85[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55745066	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55865037	0.85[EUR][1000 genomes]
rs55983978	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55986624	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56101466	0.85[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56186469	0.80[AFR][1000 genomes]
rs56858183	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57101332	0.85[AFR][1000 genomes];0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57867847	0.85[EUR][1000 genomes]
rs58448590	0.85[EUR][1000 genomes]
rs58715460	0.81[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59335949	0.85[EUR][1000 genomes]
rs59634730	0.85[EUR][1000 genomes]
rs59870074	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60324950	0.94[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60894518	0.85[EUR][1000 genomes]
rs61193782	0.93[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6984568	1.00[JPT][hapmap];0.85[EUR][1000 genomes]
rs6984597	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs6987597	0.85[EUR][1000 genomes]
rs6987624	0.85[EUR][1000 genomes]
rs6988547	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs6990298	1.00[JPT][hapmap];0.85[EUR][1000 genomes]
rs6991974	1.00[JPT][hapmap];0.88[AFR][1000 genomes];0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6998170	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7003018	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7008877	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7009678	1.00[JPT][hapmap]
rs73691182	0.85[EUR][1000 genomes]
rs73691185	0.85[EUR][1000 genomes]
rs73691186	0.85[EUR][1000 genomes]
rs73691192	0.85[EUR][1000 genomes]
rs73691193	0.85[EUR][1000 genomes]
rs73693124	0.85[EUR][1000 genomes]
rs73693135	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73693152	0.82[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73693153	0.85[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7461383	1.00[JPT][hapmap];0.85[EUR][1000 genomes]
rs7812425	0.85[EUR][1000 genomes]
rs7812510	0.82[EUR][1000 genomes]
rs7816827	0.85[EUR][1000 genomes]
rs7819894	0.82[EUR][1000 genomes]
rs7819895	0.82[EUR][1000 genomes]
rs7822754	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7833373	0.85[EUR][1000 genomes]
rs7833956	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7834516	1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7841884	1.00[JPT][hapmap];0.85[EUR][1000 genomes]
rs7842960	1.00[JPT][hapmap]
rs7844125	0.80[AFR][1000 genomes]
rs7846677	0.83[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:124 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:68104600-68193000	Strong transcription	Primary neutrophils fromperipheralblood	blood
2	chr8:68104600-68215600	Strong transcription	Monocytes-CD14+_RO01746	blood
3	chr8:68104800-68182400	Strong transcription	Primary T helper cells fromperipheralblood	blood
4	chr8:68105000-68184400	Strong transcription	Primary monocytes fromperipheralblood	blood
5	chr8:68113000-68172600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
6	chr8:68135200-68184400	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
7	chr8:68139000-68178000	Weak transcription	Small Intestine	intestine
8	chr8:68149800-68173000	Weak transcription	Psoas Muscle	Psoas
9	chr8:68153600-68181000	Strong transcription	Rectal Mucosa Donor 31	rectum
10	chr8:68153800-68168400	Strong transcription	Fetal Thymus	thymus
11	chr8:68154000-68170800	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
12	chr8:68154800-68175600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr8:68155000-68179200	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
14	chr8:68155200-68172400	Weak transcription	Stomach Mucosa	stomach
15	chr8:68155200-68173600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
16	chr8:68155600-68173200	Weak transcription	Esophagus	oesophagus
17	chr8:68155600-68175400	Weak transcription	Aorta	Aorta
18	chr8:68155600-68175400	Weak transcription	Hela-S3	cervix
19	chr8:68155600-68193800	Strong transcription	HUES64 Cell Line	embryonic stem cell
20	chr8:68155800-68226000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
21	chr8:68157600-68181400	Strong transcription	Primary B cells from cord blood	blood
22	chr8:68157800-68181000	Strong transcription	Primary T helper cells PMA-I stimulated	--
23	chr8:68158000-68181400	Strong transcription	Primary T cells fromperipheralblood	blood
24	chr8:68159000-68180600	Strong transcription	Liver	Liver
25	chr8:68159000-68221400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
26	chr8:68159400-68181000	Strong transcription	Primary T cells from cord blood	blood
27	chr8:68159600-68180800	Strong transcription	HUES6 Cell Line	embryonic stem cell
28	chr8:68159600-68180800	Strong transcription	Dnd41	blood
29	chr8:68159600-68181000	Strong transcription	Primary B cells from peripheral blood	blood
30	chr8:68159800-68170400	Strong transcription	iPS-20b Cell Line	embryonic stem cell
31	chr8:68159800-68179800	Strong transcription	Adipose Nuclei	Adipose
32	chr8:68159800-68180000	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
33	chr8:68160000-68178800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
34	chr8:68160400-68170400	Strong transcription	iPS-18 Cell Line	embryonic stem cell
35	chr8:68160400-68181000	Strong transcription	HUES48 Cell Line	embryonic stem cell
36	chr8:68160600-68168400	Strong transcription	Primary hematopoietic stem cells	blood
37	chr8:68160600-68173400	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
38	chr8:68160600-68173600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
39	chr8:68160600-68173800	Strong transcription	Breast Myoepithelial Primary Cells	Breast
40	chr8:68160800-68181000	Strong transcription	Duodenum Mucosa	Duodenum
41	chr8:68161000-68181200	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
42	chr8:68161400-68175000	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
43	chr8:68161400-68181200	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
44	chr8:68161600-68181000	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
45	chr8:68162000-68181400	Strong transcription	Rectal Mucosa Donor 29	rectum
46	chr8:68162400-68192800	Weak transcription	Gastric	stomach
47	chr8:68162400-68231000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
48	chr8:68162600-68184200	Weak transcription	Spleen	Spleen
49	chr8:68162800-68173400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
50	chr8:68163000-68171000	Weak transcription	Brain Anterior Caudate	brain

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