Variant report
Variant | rs17476541 |
---|---|
Chromosome Location | chr6:15781433-15781434 |
allele | A/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs11965065 | 0.85[JPT][hapmap] |
rs12110659 | 0.85[CHB][hapmap] |
rs13202323 | 0.90[ASN][1000 genomes] |
rs13211098 | 0.85[CHB][hapmap] |
rs16876807 | 0.85[JPT][hapmap] |
rs17411020 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1887605 | 1.00[JPT][hapmap] |
rs191986 | 0.85[CHB][hapmap] |
rs1927580 | 0.84[ASN][1000 genomes] |
rs1927581 | 0.81[ASN][1000 genomes] |
rs2002087 | 0.90[ASN][1000 genomes] |
rs2007855 | 0.85[CHB][hapmap] |
rs220890 | 1.00[JPT][hapmap];0.90[ASN][1000 genomes] |
rs220891 | 1.00[JPT][hapmap];0.90[ASN][1000 genomes] |
rs220894 | 0.90[ASN][1000 genomes] |
rs220896 | 1.00[JPT][hapmap];0.90[ASN][1000 genomes] |
rs220901 | 0.90[ASN][1000 genomes] |
rs220908 | 0.93[ASN][1000 genomes] |
rs398785 | 1.00[JPT][hapmap];0.90[ASN][1000 genomes] |
rs420350 | 1.00[JPT][hapmap];0.82[ASN][1000 genomes] |
rs56795754 | 0.85[ASN][1000 genomes] |
rs62395049 | 0.81[ASN][1000 genomes] |
rs6914413 | 0.88[ASN][1000 genomes] |
rs74111 | 0.85[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes] |
rs9464820 | 1.00[JPT][hapmap];0.90[ASN][1000 genomes] |
rs9464828 | 0.85[CHB][hapmap] |
rs9476903 | 1.00[JPT][hapmap] |
rs9476904 | 1.00[JPT][hapmap];0.84[ASN][1000 genomes] |
rs9476908 | 0.84[ASN][1000 genomes] |
rs9476909 | 0.90[ASN][1000 genomes] |
rs9476910 | 0.90[ASN][1000 genomes] |
rs9476913 | 1.00[JPT][hapmap];0.90[ASN][1000 genomes] |
rs9476930 | 0.85[CHB][hapmap] |
rs9476932 | 0.85[CHB][hapmap] |
rs9476941 | 0.85[CHB][hapmap] |
rs990062 | 1.00[JPT][hapmap];0.81[ASN][1000 genomes] |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr6:15762200-15782000 | Weak transcription | Pancreas | Pancrea |
2 | chr6:15778600-15784800 | Weak transcription | Gastric | stomach |