The 2.0 version of rSNPBase

Variant report

Variant rs2275509
Chromosome Location chr6:131247975-131247976
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:131220600-131281200 Weak transcription Fetal Adrenal Gland Adrenal Gland
2 chr6:131222200-131248400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
3 chr6:131222200-131251800 Weak transcription Primary B cells from cord blood blood
4 chr6:131222400-131248600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr6:131229600-131248600 Weak transcription Stomach Mucosa stomach
6 chr6:131229600-131249600 Weak transcription Osteobl bone
7 chr6:131234000-131250200 Weak transcription Ovary ovary
8 chr6:131234000-131250600 Weak transcription Fetal Stomach stomach
9 chr6:131234600-131248600 Weak transcription HUES6 Cell Line embryonic stem cell
10 chr6:131234600-131249400 Weak transcription Primary hematopoietic stem cells blood
11 chr6:131234600-131250200 Weak transcription Pancreas Pancrea
12 chr6:131234800-131254000 Weak transcription HUES64 Cell Line embryonic stem cell
13 chr6:131234800-131266600 Weak transcription GM12878-XiMat blood
14 chr6:131236400-131254000 Weak transcription H9 Cell Line embryonic stem cell
15 chr6:131238400-131248800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr6:131238400-131249800 Weak transcription Colon Smooth Muscle Colon
17 chr6:131238400-131250200 Weak transcription Aorta Aorta
18 chr6:131239200-131252600 Weak transcription Dnd41 blood
19 chr6:131240000-131253600 Weak transcription Breast Myoepithelial Primary Cells Breast
20 chr6:131242200-131249600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
21 chr6:131242600-131254800 Weak transcription Fetal Kidney kidney
22 chr6:131242800-131255000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
23 chr6:131244000-131248000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr6:131244200-131249400 Weak transcription NHDF-Ad bronchial
25 chr6:131244200-131250000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
26 chr6:131244200-131279000 Weak transcription Primary hematopoietic stem cells short term culture blood
27 chr6:131244800-131249800 Weak transcription HSMMtube muscle
28 chr6:131244800-131255000 Weak transcription Lung lung
29 chr6:131245000-131248600 Weak transcription Fetal Muscle Leg muscle
30 chr6:131245000-131248600 Weak transcription Sigmoid Colon Sigmoid Colon
31 chr6:131245000-131249400 Weak transcription Small Intestine intestine
32 chr6:131245000-131249600 Weak transcription Brain Hippocampus Middle brain
33 chr6:131245000-131254000 Weak transcription Left Ventricle heart
34 chr6:131245000-131254800 Weak transcription Stomach Smooth Muscle stomach
35 chr6:131245400-131248200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
36 chr6:131245400-131248600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
37 chr6:131245400-131249600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr6:131245400-131249600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr6:131245400-131253600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr6:131246200-131248200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr6:131246200-131248600 Weak transcription Fetal Lung lung
42 chr6:131246200-131249400 Weak transcription Skeletal Muscle Female skeletal muscle
43 chr6:131246200-131249800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr6:131246200-131252200 Weak transcription Fetal Muscle Trunk muscle
45 chr6:131246200-131254200 Weak transcription Fetal Intestine Large intestine
46 chr6:131246200-131264800 Weak transcription Rectal Mucosa Donor 29 rectum
47 chr6:131246400-131249000 Weak transcription Rectal Mucosa Donor 31 rectum
48 chr6:131246600-131249800 Weak transcription HUVEC blood vessel
49 chr6:131246600-131254800 Weak transcription Placenta Placenta
50 chr6:131246800-131249000 Enhancers Brain Anterior Caudate brain

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Last update: Aug 31, 2015