The 2.0 version of rSNPBase

Variant report

Variant rs3822861
Chromosome Location chr6:131239484-131239485
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:131220600-131281200 Weak transcription Fetal Adrenal Gland Adrenal Gland
2 chr6:131222200-131248400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
3 chr6:131222200-131251800 Weak transcription Primary B cells from cord blood blood
4 chr6:131222400-131248600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr6:131222600-131241200 Weak transcription A549 lung
6 chr6:131224400-131241600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
7 chr6:131228800-131245800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr6:131229400-131245200 Weak transcription Adipose Nuclei Adipose
9 chr6:131229600-131245400 Weak transcription NHLF lung
10 chr6:131229600-131248600 Weak transcription Stomach Mucosa stomach
11 chr6:131229600-131249600 Weak transcription Osteobl bone
12 chr6:131229800-131242400 Weak transcription HepG2 liver
13 chr6:131233800-131241400 Weak transcription Fetal Muscle Trunk muscle
14 chr6:131234000-131250200 Weak transcription Ovary ovary
15 chr6:131234000-131250600 Weak transcription Fetal Stomach stomach
16 chr6:131234600-131244200 Weak transcription Brain Substantia Nigra brain
17 chr6:131234600-131244200 Weak transcription Small Intestine intestine
18 chr6:131234600-131244600 Weak transcription Left Ventricle heart
19 chr6:131234600-131248600 Weak transcription HUES6 Cell Line embryonic stem cell
20 chr6:131234600-131249400 Weak transcription Primary hematopoietic stem cells blood
21 chr6:131234600-131250200 Weak transcription Pancreas Pancrea
22 chr6:131234800-131244400 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr6:131234800-131245000 Weak transcription HSMM muscle
24 chr6:131234800-131246800 Weak transcription Primary B cells from peripheral blood blood
25 chr6:131234800-131247200 Weak transcription Brain Inferior Temporal Lobe brain
26 chr6:131234800-131254000 Weak transcription HUES64 Cell Line embryonic stem cell
27 chr6:131234800-131266600 Weak transcription GM12878-XiMat blood
28 chr6:131235800-131244200 Weak transcription Fetal Muscle Leg muscle
29 chr6:131236400-131254000 Weak transcription H9 Cell Line embryonic stem cell
30 chr6:131238000-131244800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr6:131238400-131242200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr6:131238400-131248800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr6:131238400-131249800 Weak transcription Colon Smooth Muscle Colon
34 chr6:131238400-131250200 Weak transcription Aorta Aorta
35 chr6:131239200-131252600 Weak transcription Dnd41 blood
36 chr6:131239400-131239800 Weak transcription Breast Myoepithelial Primary Cells Breast
37 chr6:131239400-131239800 Enhancers Fetal Lung lung

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Last update: Aug 31, 2015