The 2.0 version of rSNPBase

Variant report

Variant rs2644745
Chromosome Location chr5:154313853-154313854
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:154266200-154316600 Weak transcription Stomach Mucosa stomach
2 chr5:154266400-154315600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
3 chr5:154267800-154315600 Strong transcription Primary T helper cells fromperipheralblood blood
4 chr5:154268000-154315600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr5:154268200-154315000 Strong transcription HUES6 Cell Line embryonic stem cell
6 chr5:154268200-154315600 Strong transcription Primary hematopoietic stem cells short term culture blood
7 chr5:154268200-154316200 Strong transcription HUES64 Cell Line embryonic stem cell
8 chr5:154269800-154315400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr5:154269800-154316200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
10 chr5:154273600-154316600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr5:154276200-154314600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr5:154283200-154316600 Weak transcription ES-WA7 Cell Line embryonic stem cell
13 chr5:154291600-154316600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr5:154292600-154316200 Weak transcription Fetal Heart heart
15 chr5:154294000-154315400 Strong transcription Adipose Nuclei Adipose
16 chr5:154294000-154315800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr5:154294200-154314800 Strong transcription Primary T helper naive cells fromperipheralblood blood
18 chr5:154294400-154315200 Strong transcription iPS-18 Cell Line embryonic stem cell
19 chr5:154301800-154314200 Strong transcription Fetal Stomach stomach
20 chr5:154302600-154315400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr5:154304000-154316400 Weak transcription Small Intestine intestine
22 chr5:154304200-154316200 Weak transcription NHLF lung
23 chr5:154305200-154315400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr5:154305800-154317000 Weak transcription Placenta Amnion Placenta Amnion
25 chr5:154306400-154316200 Weak transcription Pancreatic Islets Pancreatic Islet
26 chr5:154306800-154316600 Weak transcription Pancreas Pancrea
27 chr5:154307000-154316200 Weak transcription NHDF-Ad bronchial
28 chr5:154307200-154316600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
29 chr5:154307200-154316600 Weak transcription Primary neutrophils fromperipheralblood blood
30 chr5:154307400-154316400 Weak transcription Primary T helper naive cells from peripheral blood blood
31 chr5:154307400-154316600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr5:154307400-154316600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
33 chr5:154307400-154316600 Weak transcription Esophagus oesophagus
34 chr5:154307400-154316600 Weak transcription Gastric stomach
35 chr5:154307600-154314400 Weak transcription Skeletal Muscle Male skeletal muscle
36 chr5:154308400-154315600 Weak transcription Fetal Brain Male brain
37 chr5:154309400-154316200 Weak transcription iPS-15b Cell Line embryonic stem cell
38 chr5:154310000-154316600 Weak transcription Thymus Thymus
39 chr5:154310200-154314200 Weak transcription ES-I3 Cell Line embryonic stem cell
40 chr5:154310400-154316400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
41 chr5:154310400-154316600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
42 chr5:154310600-154314800 Weak transcription Muscle Satellite Cultured Cells --
43 chr5:154311000-154314400 Weak transcription Hela-S3 cervix
44 chr5:154311000-154316200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
45 chr5:154311000-154316200 Weak transcription Rectal Smooth Muscle rectum
46 chr5:154311000-154316400 Weak transcription Primary T killer memory cells from peripheral blood blood
47 chr5:154311000-154316400 Weak transcription Colonic Mucosa Colon
48 chr5:154311200-154314200 Weak transcription NH-A brain
49 chr5:154311200-154314400 Weak transcription Brain Hippocampus Middle brain
50 chr5:154311200-154314400 Weak transcription Rectal Mucosa Donor 29 rectum

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Last update: Aug 31, 2015