Variant report

Variant rs6580117
Chromosome Location chr5:154266668-154266669
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:154248600-154267600 Weak transcription Right Atrium heart
2 chr5:154262000-154268400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
3 chr5:154262000-154268800 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
4 chr5:154262800-154268000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
5 chr5:154262800-154300800 Strong transcription Fetal Brain Female brain
6 chr5:154263800-154267600 ZNF genes & repeats Primary B cells from cord blood blood
7 chr5:154263800-154268200 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr5:154264000-154266800 ZNF genes & repeats ES-I3 Cell Line embryonic stem cell
9 chr5:154264000-154266800 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
10 chr5:154264000-154266800 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
11 chr5:154264000-154266800 ZNF genes & repeats Fetal Lung lung
12 chr5:154264000-154267600 ZNF genes & repeats Primary hematopoietic stem cells blood
13 chr5:154264000-154267600 ZNF genes & repeats Fetal Muscle Leg muscle
14 chr5:154264000-154268200 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
15 chr5:154264000-154268200 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
16 chr5:154264000-154268400 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr5:154264000-154268600 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
18 chr5:154264000-154272200 Strong transcription HSMM muscle
19 chr5:154264000-154276600 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr5:154264000-154312800 Strong transcription Fetal Adrenal Gland Adrenal Gland
21 chr5:154264200-154266800 ZNF genes & repeats Primary T helper naive cells from peripheral blood blood
22 chr5:154264200-154266800 ZNF genes & repeats HMEC breast
23 chr5:154264200-154267000 ZNF genes & repeats Primary mononuclear cells fromperipheralblood Blood
24 chr5:154264200-154267600 ZNF genes & repeats Duodenum Mucosa Duodenum
25 chr5:154264200-154267800 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
26 chr5:154264200-154268000 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr5:154264200-154268200 Strong transcription Fetal Brain Male brain
28 chr5:154264200-154269600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr5:154264200-154275600 Strong transcription Brain Anterior Caudate brain
30 chr5:154264400-154267000 ZNF genes & repeats Primary T cells from cord blood blood
31 chr5:154264400-154267200 ZNF genes & repeats Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr5:154264400-154267200 ZNF genes & repeats Primary B cells from peripheral blood blood
33 chr5:154264400-154267600 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
34 chr5:154264400-154268200 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr5:154264400-154274200 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
36 chr5:154264600-154266800 ZNF genes & repeats Muscle Satellite Cultured Cells --
37 chr5:154264600-154266800 ZNF genes & repeats Adipose Nuclei Adipose
38 chr5:154264600-154266800 ZNF genes & repeats Rectal Mucosa Donor 29 rectum
39 chr5:154264600-154266800 ZNF genes & repeats Stomach Smooth Muscle stomach
40 chr5:154264600-154266800 ZNF genes & repeats A549 lung
41 chr5:154264600-154267000 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr5:154264600-154268000 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
43 chr5:154264600-154268200 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
44 chr5:154264800-154266800 ZNF genes & repeats iPS-18 Cell Line embryonic stem cell
45 chr5:154264800-154266800 ZNF genes & repeats NHDF-Ad bronchial
46 chr5:154264800-154267000 ZNF genes & repeats Primary T cells fromperipheralblood blood
47 chr5:154264800-154267000 ZNF genes & repeats NHEK skin
48 chr5:154264800-154267600 ZNF genes & repeats iPS-15b Cell Line embryonic stem cell
49 chr5:154264800-154267600 ZNF genes & repeats Liver Liver
50 chr5:154264800-154272200 Strong transcription Placenta Amnion Placenta Amnion

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