Variant report

Variant rs2560069
Chromosome Location chr5:154242349-154242350
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:154239200-154244400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr5:154239400-154249800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr5:154239600-154263800 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr5:154239800-154243200 Enhancers Small Intestine intestine
5 chr5:154239800-154244400 Weak transcription Ovary ovary
6 chr5:154240000-154242400 Enhancers Fetal Adrenal Gland Adrenal Gland
7 chr5:154240000-154242800 Weak transcription H1 Cell Line embryonic stem cell
8 chr5:154240000-154242800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
9 chr5:154240000-154243000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
10 chr5:154240000-154244400 Weak transcription Esophagus oesophagus
11 chr5:154240200-154242800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr5:154240200-154242800 Enhancers Primary B cells from peripheral blood blood
13 chr5:154240200-154242800 Weak transcription Fetal Intestine Small intestine
14 chr5:154240200-154242800 Weak transcription Fetal Muscle Trunk muscle
15 chr5:154240200-154242800 Weak transcription Fetal Muscle Leg muscle
16 chr5:154240200-154242800 Weak transcription Fetal Stomach stomach
17 chr5:154240200-154244000 Weak transcription iPS-15b Cell Line embryonic stem cell
18 chr5:154240200-154244400 Weak transcription Right Ventricle heart
19 chr5:154240200-154244600 Weak transcription Placenta Amnion Placenta Amnion
20 chr5:154240200-154244800 Weak transcription H9 Cell Line embryonic stem cell
21 chr5:154240200-154248000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
22 chr5:154240200-154248000 Weak transcription Gastric stomach
23 chr5:154240200-154249800 Weak transcription Pancreas Pancrea
24 chr5:154240400-154242400 Enhancers Primary T killer naive cells fromperipheralblood blood
25 chr5:154240400-154242800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
26 chr5:154240400-154242800 Weak transcription Brain Cingulate Gyrus brain
27 chr5:154240400-154242800 Weak transcription Placenta Placenta
28 chr5:154240400-154242800 Weak transcription Stomach Smooth Muscle stomach
29 chr5:154240400-154243800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr5:154240400-154244200 Weak transcription Fetal Brain Female brain
31 chr5:154240400-154244600 Weak transcription HMEC breast
32 chr5:154240400-154245000 Weak transcription Rectal Smooth Muscle rectum
33 chr5:154240400-154250200 Weak transcription Fetal Brain Male brain
34 chr5:154240600-154242400 Weak transcription Breast Myoepithelial Primary Cells Breast
35 chr5:154240600-154242400 Weak transcription Cortex derived primary cultured neurospheres brain
36 chr5:154240600-154242400 Weak transcription NH-A brain
37 chr5:154240600-154242800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
38 chr5:154240600-154243000 Enhancers Primary T helper naive cells fromperipheralblood blood
39 chr5:154240600-154243000 Weak transcription Brain Hippocampus Middle brain
40 chr5:154240600-154244200 Weak transcription NHEK skin
41 chr5:154240600-154244400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
42 chr5:154240600-154244800 Weak transcription HSMMtube muscle
43 chr5:154240600-154245000 Weak transcription Brain Anterior Caudate brain
44 chr5:154240600-154245000 Weak transcription Brain Substantia Nigra brain
45 chr5:154240600-154245200 Weak transcription Aorta Aorta
46 chr5:154240600-154245600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
47 chr5:154240600-154251000 Weak transcription Fetal Heart heart
48 chr5:154240600-154264800 Weak transcription Stomach Mucosa stomach
49 chr5:154240800-154242400 Weak transcription HUES48 Cell Line embryonic stem cell
50 chr5:154240800-154242600 Enhancers Muscle Satellite Cultured Cells --

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