Variant report

Variant rs40584
Chromosome Location chr5:154239923-154239924
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:154236200-154240600 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
2 chr5:154236600-154240400 Active TSS Lung lung
3 chr5:154236600-154240600 Active TSS Aorta Aorta
4 chr5:154236800-154240000 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr5:154236800-154240000 Active TSS A549 lung
6 chr5:154237000-154240200 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr5:154237000-154240200 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
8 chr5:154238400-154240200 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
9 chr5:154238600-154240000 Flanking Active TSS Fetal Brain Male brain
10 chr5:154238600-154240000 Flanking Active TSS Fetal Brain Female brain
11 chr5:154238600-154240200 Flanking Active TSS Cortex derived primary cultured neurospheres brain
12 chr5:154238600-154240400 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
13 chr5:154238600-154240400 Flanking Active TSS Skeletal Muscle Female skeletal muscle
14 chr5:154238600-154240600 Flanking Active TSS Primary neutrophils fromperipheralblood blood
15 chr5:154238600-154240800 Flanking Active TSS Adipose Nuclei Adipose
16 chr5:154238600-154241000 Flanking Active TSS Primary T helper cells fromperipheralblood blood
17 chr5:154238600-154241200 Flanking Active TSS Primary B cells from cord blood blood
18 chr5:154238600-154241200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr5:154238600-154241400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr5:154238800-154240200 Flanking Active TSS Liver Liver
21 chr5:154238800-154240200 Flanking Active TSS Skeletal Muscle Male skeletal muscle
22 chr5:154238800-154241000 Flanking Active TSS Primary hematopoietic stem cells blood
23 chr5:154238800-154241000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr5:154239000-154240000 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
25 chr5:154239000-154240000 Flanking Active TSS Brain Hippocampus Middle brain
26 chr5:154239000-154240000 Transcr. at gene 5' and 3' K562 blood
27 chr5:154239000-154240200 Flanking Active TSS Brain Anterior Caudate brain
28 chr5:154239000-154240600 Flanking Active TSS Duodenum Mucosa Duodenum
29 chr5:154239000-154240800 Flanking Active TSS HUVEC blood vessel
30 chr5:154239000-154241200 Flanking Active TSS Dnd41 blood
31 chr5:154239000-154241200 Flanking Active TSS Monocytes-CD14+_RO01746 blood
32 chr5:154239200-154240000 Flanking Active TSS iPS-15b Cell Line embryonic stem cell
33 chr5:154239200-154240000 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
34 chr5:154239200-154240000 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland
35 chr5:154239200-154240000 Flanking Active TSS Fetal Intestine Small intestine
36 chr5:154239200-154240000 Flanking Active TSS Fetal Lung lung
37 chr5:154239200-154240200 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
38 chr5:154239200-154240200 Flanking Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr5:154239200-154240200 Flanking Active TSS Primary B cells from peripheral blood blood
40 chr5:154239200-154240200 Flanking Active TSS NHEK skin
41 chr5:154239200-154240400 Flanking Active TSS Primary monocytes fromperipheralblood blood
42 chr5:154239200-154240400 Flanking Active TSS Psoas Muscle Psoas
43 chr5:154239200-154240400 Flanking Active TSS Stomach Smooth Muscle stomach
44 chr5:154239200-154240400 Active TSS HepG2 liver
45 chr5:154239200-154240400 Flanking Active TSS HMEC breast
46 chr5:154239200-154240600 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
47 chr5:154239200-154240600 Flanking Active TSS Hela-S3 cervix
48 chr5:154239200-154240600 Flanking Active TSS NH-A brain
49 chr5:154239200-154240800 Flanking Active TSS Brain Germinal Matrix brain
50 chr5:154239200-154240800 Flanking Active TSS Osteobl bone

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