Variant report

Variant rs2544862
Chromosome Location chr5:154207968-154207969
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:154174000-154212200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
2 chr5:154181000-154211600 Strong transcription Brain Hippocampus Middle brain
3 chr5:154182000-154211400 Strong transcription Left Ventricle heart
4 chr5:154187000-154211400 Strong transcription Fetal Stomach stomach
5 chr5:154191600-154208600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
6 chr5:154191800-154211600 Strong transcription Adipose Nuclei Adipose
7 chr5:154193000-154211800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
8 chr5:154194000-154209400 Strong transcription Breast Myoepithelial Primary Cells Breast
9 chr5:154195600-154208000 Weak transcription Primary T helper naive cells from peripheral blood blood
10 chr5:154195600-154214400 Weak transcription Small Intestine intestine
11 chr5:154196000-154229200 Weak transcription Psoas Muscle Psoas
12 chr5:154196400-154214000 Weak transcription Pancreatic Islets Pancreatic Islet
13 chr5:154196600-154208000 Weak transcription Placenta Amnion Placenta Amnion
14 chr5:154197600-154208400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
15 chr5:154197600-154214400 Weak transcription HUVEC blood vessel
16 chr5:154197800-154214400 Weak transcription Hela-S3 cervix
17 chr5:154198600-154211200 Strong transcription Stomach Smooth Muscle stomach
18 chr5:154198600-154211400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr5:154199400-154209000 Weak transcription iPS-18 Cell Line embryonic stem cell
20 chr5:154199400-154214400 Weak transcription Right Atrium heart
21 chr5:154200200-154209200 Strong transcription Fetal Muscle Trunk muscle
22 chr5:154200200-154214400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr5:154200400-154209000 Weak transcription Primary B cells from cord blood blood
24 chr5:154200800-154214000 Weak transcription Fetal Heart heart
25 chr5:154201000-154228000 Weak transcription Fetal Brain Male brain
26 chr5:154201200-154208600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr5:154202400-154208000 Weak transcription Rectal Mucosa Donor 31 rectum
28 chr5:154202400-154208800 Strong transcription Fetal Muscle Leg muscle
29 chr5:154203400-154208800 Weak transcription Colonic Mucosa Colon
30 chr5:154203400-154209000 Weak transcription Stomach Mucosa stomach
31 chr5:154203400-154229000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
32 chr5:154203600-154214400 Weak transcription iPS-15b Cell Line embryonic stem cell
33 chr5:154203800-154208000 Weak transcription HUES48 Cell Line embryonic stem cell
34 chr5:154203800-154208400 Weak transcription Primary T regulatory cells fromperipheralblood blood
35 chr5:154203800-154210600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
36 chr5:154203800-154211400 Strong transcription Fetal Adrenal Gland Adrenal Gland
37 chr5:154204000-154208000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
38 chr5:154204000-154208000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
39 chr5:154204000-154208600 Weak transcription Primary hematopoietic stem cells blood
40 chr5:154204000-154208800 Weak transcription HUES64 Cell Line embryonic stem cell
41 chr5:154204000-154208800 Weak transcription Fetal Brain Female brain
42 chr5:154204000-154209000 Weak transcription Pancreas Pancrea
43 chr5:154204000-154209200 Weak transcription NHLF lung
44 chr5:154204000-154210000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr5:154204200-154208000 Weak transcription ES-I3 Cell Line embryonic stem cell
46 chr5:154204200-154208000 Weak transcription Esophagus oesophagus
47 chr5:154204200-154208000 Weak transcription Spleen Spleen
48 chr5:154204200-154208000 Weak transcription HSMM muscle
49 chr5:154204200-154208000 Weak transcription K562 blood
50 chr5:154204200-154208600 Weak transcription H1 Cell Line embryonic stem cell

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