Variant report

Variant	rs2792800
Chromosome Location	chr1:56713560-56713561
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 33 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs11206756	0.80[EUR][1000 genomes]
rs12117416	0.81[EUR][1000 genomes]
rs12118298	0.81[EUR][1000 genomes]
rs12119318	0.81[EUR][1000 genomes]
rs12121243	0.81[EUR][1000 genomes]
rs12129181	0.81[EUR][1000 genomes]
rs12132862	0.81[EUR][1000 genomes]
rs12140232	0.81[EUR][1000 genomes]
rs12140564	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs12140921	0.80[AMR][1000 genomes]
rs12143116	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs12144574	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs1341337	0.93[AMR][1000 genomes]
rs1341339	0.98[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs1341358	0.87[AFR][1000 genomes];0.99[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1417768	0.89[AMR][1000 genomes]
rs1417771	0.95[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2792797	0.90[AMR][1000 genomes]
rs2792798	0.91[AFR][1000 genomes];0.99[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2792799	0.84[AFR][1000 genomes];0.99[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs57193460	0.80[AMR][1000 genomes]
rs6588612	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs6673309	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs6685185	0.80[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs6687944	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs72675591	0.81[EUR][1000 genomes]
rs72677469	0.87[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs72677477	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7512771	0.81[EUR][1000 genomes]
rs7512969	0.80[AMR][1000 genomes]
rs7548377	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs7554047	0.80[EUR][1000 genomes]
rs7556455	0.81[EUR][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:56695200-56721200	Weak transcription	Psoas Muscle	Psoas
2	chr1:56702200-56721400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr1:56712400-56715400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr1:56712400-56715400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
5	chr1:56713200-56714600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
6	chr1:56713400-56714800	Weak transcription	Cortex derived primary cultured neurospheres	brain

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