Variant report

Variant	rs11206756
Chromosome Location	chr1:56665700-56665701
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 45 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:45)

rs_ID	r²[population]
rs10888959	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11206759	0.83[AMR][1000 genomes]
rs11206760	0.81[AMR][1000 genomes]
rs12117416	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12118289	0.83[AMR][1000 genomes]
rs12118298	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12118755	0.85[EUR][1000 genomes]
rs12119318	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12119413	0.83[AMR][1000 genomes]
rs12121243	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12126843	0.82[AMR][1000 genomes]
rs12129181	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12132862	0.93[EUR][1000 genomes]
rs12136560	0.80[EUR][1000 genomes]
rs12140232	0.93[EUR][1000 genomes]
rs12140564	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12140921	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12142085	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs12143116	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12144574	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1341337	0.81[EUR][1000 genomes]
rs1341339	0.90[CEU][hapmap];0.95[EUR][1000 genomes]
rs1341358	0.94[EUR][1000 genomes]
rs1417768	0.83[EUR][1000 genomes]
rs1417771	0.90[CEU][hapmap];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17423986	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2792798	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2792799	0.94[EUR][1000 genomes]
rs2792800	0.80[EUR][1000 genomes]
rs57193460	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs6588611	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs6588612	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs6673309	0.90[CEU][hapmap];0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6685185	0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6687944	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs6694549	0.83[AMR][1000 genomes]
rs72675587	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs72675591	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72677469	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs72677477	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7512771	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7512969	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7548377	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7554047	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7556455	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:56653800-56669400	Enhancers	Placenta	Placenta
2	chr1:56657600-56667800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
3	chr1:56657800-56665800	Weak transcription	Fetal Kidney	kidney
4	chr1:56658200-56665800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
5	chr1:56661800-56666000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
6	chr1:56662200-56668600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr1:56662800-56666600	Enhancers	Psoas Muscle	Psoas
8	chr1:56662800-56667600	Enhancers	Fetal Muscle Leg	muscle
9	chr1:56663000-56667200	Enhancers	Skeletal Muscle Female	skeletal muscle
10	chr1:56663200-56668000	Enhancers	Skeletal Muscle Male	skeletal muscle
11	chr1:56663200-56670000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
12	chr1:56663400-56666400	Enhancers	Left Ventricle	heart
13	chr1:56664400-56669200	Weak transcription	Right Ventricle	heart
14	chr1:56664600-56666800	Enhancers	HSMMtube	muscle
15	chr1:56664800-56667000	Enhancers	Hela-S3	cervix
16	chr1:56665000-56666200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
17	chr1:56665400-56665800	Enhancers	Cortex derived primary cultured neurospheres	brain
18	chr1:56665400-56666400	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
19	chr1:56665600-56666200	Enhancers	Dnd41	blood
20	chr1:56665600-56666400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
21	chr1:56665600-56666400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
22	chr1:56665600-56666800	Enhancers	Placenta Amnion	Placenta Amnion
23	chr1:56665600-56668800	Enhancers	NHDF-Ad	bronchial
24	chr1:56665600-56669000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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