Variant report

Variant	rs11206760
Chromosome Location	chr1:56700958-56700959
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 55 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:55)

rs_ID	r²[population]
rs10888959	0.81[AMR][1000 genomes]
rs11206756	0.81[AMR][1000 genomes]
rs11206759	0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12117416	0.80[AMR][1000 genomes]
rs12118289	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12118298	0.80[AMR][1000 genomes]
rs12119413	0.85[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12121243	0.80[AMR][1000 genomes]
rs12126843	0.88[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12132862	0.80[AMR][1000 genomes]
rs12136560	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs12140232	0.80[AMR][1000 genomes]
rs12140564	0.87[AFR][1000 genomes];0.88[AMR][1000 genomes]
rs12140921	0.82[AMR][1000 genomes]
rs12142085	0.89[AFR][1000 genomes];0.91[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12143116	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs12144574	0.87[AFR][1000 genomes];0.88[AMR][1000 genomes]
rs1230036	0.83[ASN][1000 genomes]
rs1234587	0.83[ASN][1000 genomes]
rs1341337	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs1417768	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2246574	0.81[ASN][1000 genomes]
rs2487318	0.83[ASN][1000 genomes]
rs2792773	0.80[AFR][1000 genomes];0.83[ASN][1000 genomes]
rs2792797	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4927308	0.80[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs57193460	0.88[AFR][1000 genomes];0.96[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs6588611	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs6588612	0.89[AFR][1000 genomes];0.88[AMR][1000 genomes]
rs6673309	0.87[AFR][1000 genomes];0.88[AMR][1000 genomes]
rs6685185	0.84[AMR][1000 genomes]
rs6687944	0.86[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs6694549	0.85[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72675591	0.81[AMR][1000 genomes]
rs72677469	0.87[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs72677477	0.88[AFR][1000 genomes];0.88[AMR][1000 genomes]
rs7512771	0.80[AMR][1000 genomes]
rs7512969	0.96[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7548377	0.85[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs7554047	0.81[AMR][1000 genomes]
rs778392	0.81[ASN][1000 genomes]
rs778394	0.81[ASN][1000 genomes]
rs778399	0.83[ASN][1000 genomes]
rs778400	0.83[ASN][1000 genomes]
rs778401	0.82[ASN][1000 genomes]
rs778402	0.83[ASN][1000 genomes]
rs778403	0.82[ASN][1000 genomes]
rs778404	0.83[ASN][1000 genomes]
rs778405	0.83[ASN][1000 genomes]
rs778406	0.99[ASN][1000 genomes]
rs778407	0.83[ASN][1000 genomes]
rs778409	0.83[ASN][1000 genomes]
rs778411	0.83[ASN][1000 genomes]
rs778412	0.83[ASN][1000 genomes]
rs778413	0.83[ASN][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:56695200-56721200	Weak transcription	Psoas Muscle	Psoas
2	chr1:56696600-56701800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr1:56700600-56701000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr1:56700600-56701200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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