Variant report

Variant	rs11206759
Chromosome Location	chr1:56699982-56699983
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 49 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:49)

rs_ID	r²[population]
rs10888959	0.83[AMR][1000 genomes]
rs11206756	0.83[AMR][1000 genomes]
rs11206760	0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12118289	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12119318	0.80[AMR][1000 genomes]
rs12119413	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12126843	0.85[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12136560	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs12140564	0.90[AMR][1000 genomes]
rs12142085	0.86[AFR][1000 genomes];0.94[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12143116	0.88[AMR][1000 genomes]
rs12144574	0.90[AMR][1000 genomes]
rs1230036	0.81[ASN][1000 genomes]
rs1234587	0.81[ASN][1000 genomes]
rs1341337	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs1417768	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2246574	0.87[AFR][1000 genomes]
rs2487318	0.87[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs2792773	0.88[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs2792797	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4927308	0.88[AFR][1000 genomes];0.83[ASN][1000 genomes]
rs57193460	0.94[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs6588611	0.87[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs6588612	0.82[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs6673309	0.86[AMR][1000 genomes]
rs6685185	0.87[AMR][1000 genomes]
rs6687944	0.88[AMR][1000 genomes]
rs6694549	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs706358	0.82[ASN][1000 genomes]
rs72675591	0.83[AMR][1000 genomes]
rs72677469	0.87[AMR][1000 genomes]
rs72677477	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs7512969	0.94[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7548377	0.88[AMR][1000 genomes]
rs7554047	0.83[AMR][1000 genomes]
rs778388	0.81[ASN][1000 genomes]
rs778390	0.82[ASN][1000 genomes]
rs778391	0.82[ASN][1000 genomes]
rs778392	0.83[ASN][1000 genomes]
rs778393	0.82[ASN][1000 genomes]
rs778394	0.83[ASN][1000 genomes]
rs778396	0.81[ASN][1000 genomes]
rs778399	0.81[ASN][1000 genomes]
rs778400	0.81[ASN][1000 genomes]
rs778404	0.81[ASN][1000 genomes]
rs778405	0.81[ASN][1000 genomes]
rs778406	0.96[ASN][1000 genomes]
rs778411	0.81[ASN][1000 genomes]
rs801273	0.82[ASN][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:56695200-56721200	Weak transcription	Psoas Muscle	Psoas
2	chr1:56695600-56700000	Weak transcription	Cortex derived primary cultured neurospheres	brain
3	chr1:56696600-56701800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr1:56699800-56700200	Enhancers	Fetal Lung	lung

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