Variant report

Variant	rs28537733
Chromosome Location	chr6:143696076-143696077
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:143695462..143698122-chr6:143769366..143771322,2	K562	blood:

Variant related genes	Relation type
ENSG00000223203	Chromatin interaction

Extended variants
information (count: 40 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:40)

rs_ID	r²[population]
rs10080658	1.00[ASN][1000 genomes]
rs13437539	1.00[ASN][1000 genomes]
rs17072448	1.00[ASN][1000 genomes]
rs2146300	1.00[ASN][1000 genomes]
rs4467794	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs55790446	0.81[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs56827403	1.00[ASN][1000 genomes]
rs56884593	1.00[ASN][1000 genomes]
rs57184543	1.00[ASN][1000 genomes]
rs57498557	1.00[ASN][1000 genomes]
rs59134343	1.00[ASN][1000 genomes]
rs59572336	1.00[ASN][1000 genomes]
rs59940435	1.00[ASN][1000 genomes]
rs6570553	1.00[ASN][1000 genomes]
rs6935733	1.00[ASN][1000 genomes]
rs73594139	1.00[ASN][1000 genomes]
rs73594165	1.00[ASN][1000 genomes]
rs9484726	1.00[ASN][1000 genomes]
rs9484727	1.00[ASN][1000 genomes]
rs9484732	0.81[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs9484734	0.81[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs9484738	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs9496544	1.00[ASN][1000 genomes]
rs9496547	1.00[ASN][1000 genomes]
rs9496548	1.00[ASN][1000 genomes]
rs9496550	1.00[ASN][1000 genomes]
rs9496551	1.00[ASN][1000 genomes]
rs9496562	1.00[ASN][1000 genomes]
rs9496563	0.81[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs9496564	1.00[ASN][1000 genomes]
rs9496580	1.00[ASN][1000 genomes]
rs9496581	1.00[ASN][1000 genomes]
rs9496583	1.00[ASN][1000 genomes]
rs9496586	1.00[ASN][1000 genomes]
rs9496590	0.81[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs9496595	1.00[ASN][1000 genomes]
rs9496596	0.81[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs9496599	0.81[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs9496604	0.90[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs9496608	0.90[AMR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:143673000-143708000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr6:143694200-143697000	Enhancers	GM12878-XiMat	blood

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