Variant report
| Variant | rs4467794 |
|---|---|
| Chromosome Location | chr6:143707065-143707066 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:40)
| rs_ID | r2[population] |
|---|---|
| rs10080658 | 1.00[ASN][1000 genomes] |
| rs13437539 | 1.00[ASN][1000 genomes] |
| rs17072448 | 1.00[ASN][1000 genomes] |
| rs2146300 | 1.00[ASN][1000 genomes] |
| rs28537733 | 0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes] |
| rs55790446 | 0.81[AMR][1000 genomes];1.00[ASN][1000 genomes] |
| rs56827403 | 1.00[ASN][1000 genomes] |
| rs56884593 | 1.00[ASN][1000 genomes] |
| rs57184543 | 1.00[ASN][1000 genomes] |
| rs57498557 | 1.00[ASN][1000 genomes] |
| rs59134343 | 1.00[ASN][1000 genomes] |
| rs59572336 | 1.00[ASN][1000 genomes] |
| rs59940435 | 1.00[ASN][1000 genomes] |
| rs6570553 | 1.00[ASN][1000 genomes] |
| rs6935733 | 1.00[ASN][1000 genomes] |
| rs73594139 | 1.00[ASN][1000 genomes] |
| rs73594165 | 1.00[ASN][1000 genomes] |
| rs9484726 | 1.00[ASN][1000 genomes] |
| rs9484727 | 1.00[ASN][1000 genomes] |
| rs9484732 | 0.81[AMR][1000 genomes];1.00[ASN][1000 genomes] |
| rs9484734 | 0.90[AMR][1000 genomes];1.00[ASN][1000 genomes] |
| rs9484738 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes] |
| rs9496544 | 1.00[ASN][1000 genomes] |
| rs9496547 | 1.00[ASN][1000 genomes] |
| rs9496548 | 1.00[ASN][1000 genomes] |
| rs9496550 | 1.00[ASN][1000 genomes] |
| rs9496551 | 1.00[ASN][1000 genomes] |
| rs9496562 | 1.00[ASN][1000 genomes] |
| rs9496563 | 0.81[AMR][1000 genomes];1.00[ASN][1000 genomes] |
| rs9496564 | 1.00[ASN][1000 genomes] |
| rs9496580 | 1.00[ASN][1000 genomes] |
| rs9496581 | 1.00[ASN][1000 genomes] |
| rs9496583 | 1.00[ASN][1000 genomes] |
| rs9496586 | 1.00[ASN][1000 genomes] |
| rs9496590 | 0.81[AMR][1000 genomes];1.00[ASN][1000 genomes] |
| rs9496595 | 1.00[ASN][1000 genomes] |
| rs9496596 | 0.81[AMR][1000 genomes];1.00[ASN][1000 genomes] |
| rs9496599 | 0.90[AMR][1000 genomes];1.00[ASN][1000 genomes] |
| rs9496604 | 0.90[AMR][1000 genomes];1.00[ASN][1000 genomes] |
| rs9496608 | 0.90[AMR][1000 genomes];1.00[ASN][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:143673000-143708000 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 2 | chr6:143706600-143757400 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
