The 2.0 version of rSNPBase

Variant report

Variant rs2864072
Chromosome Location chr11:46468859-46468860
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:46455200-46472200 Weak transcription Ovary ovary
2 chr11:46455200-46488800 Weak transcription Hela-S3 cervix
3 chr11:46455400-46492200 Weak transcription A549 lung
4 chr11:46456600-46469600 Weak transcription Fetal Brain Female brain
5 chr11:46456600-46493600 Weak transcription Colonic Mucosa Colon
6 chr11:46456800-46494200 Weak transcription Primary T killer naive cells fromperipheralblood blood
7 chr11:46456800-46515000 Weak transcription Primary T helper naive cells from peripheral blood blood
8 chr11:46457200-46472400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr11:46457800-46470200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
10 chr11:46458200-46477200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr11:46460800-46472600 Weak transcription Small Intestine intestine
12 chr11:46464000-46470000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
13 chr11:46464200-46472400 Weak transcription Primary T killer memory cells from peripheral blood blood
14 chr11:46464200-46489200 Weak transcription Thymus Thymus
15 chr11:46464200-46489400 Weak transcription Fetal Muscle Trunk muscle
16 chr11:46464200-46513000 Weak transcription Primary hematopoietic stem cells blood
17 chr11:46464400-46489600 Weak transcription Placenta Placenta
18 chr11:46464600-46469000 Weak transcription Pancreas Pancrea
19 chr11:46464800-46478600 Weak transcription Spleen Spleen
20 chr11:46464800-46479000 Weak transcription NHEK skin
21 chr11:46465000-46470000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
22 chr11:46465000-46472400 Weak transcription NH-A brain
23 chr11:46465000-46513400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr11:46465200-46469000 Weak transcription Gastric stomach
25 chr11:46465200-46471200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr11:46465200-46474600 Weak transcription Fetal Intestine Small intestine
27 chr11:46465200-46475200 Weak transcription Duodenum Mucosa Duodenum
28 chr11:46465200-46479200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr11:46465200-46479400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr11:46465200-46489200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
31 chr11:46465200-46489400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
32 chr11:46465200-46489400 Weak transcription Rectal Mucosa Donor 29 rectum
33 chr11:46465200-46489400 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr11:46465200-46494600 Weak transcription Rectal Mucosa Donor 31 rectum
35 chr11:46465200-46504400 Weak transcription Primary monocytes fromperipheralblood blood
36 chr11:46465400-46469200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
37 chr11:46465400-46472200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr11:46465400-46476600 Weak transcription Primary neutrophils fromperipheralblood blood
39 chr11:46465400-46483200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr11:46465400-46489400 Weak transcription Primary hematopoietic stem cells short term culture blood
41 chr11:46465600-46469000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
42 chr11:46465600-46469000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr11:46465600-46472200 Weak transcription Primary B cells from cord blood blood
44 chr11:46465600-46472600 Weak transcription Fetal Intestine Large intestine
45 chr11:46465600-46476800 Weak transcription Primary B cells from peripheral blood blood
46 chr11:46465600-46489400 Weak transcription Primary T helper cells PMA-I stimulated --
47 chr11:46465600-46511200 Weak transcription Primary T helper naive cells fromperipheralblood blood
48 chr11:46465800-46472400 Weak transcription Breast Myoepithelial Primary Cells Breast
49 chr11:46465800-46474400 Weak transcription HepG2 liver
50 chr11:46465800-46476800 Weak transcription Fetal Thymus thymus

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Last update: Aug 31, 2015