Variant report

Variant rs3802888
Chromosome Location chr11:46515902-46515903
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:46479000-46525600 Weak transcription Lung lung
2 chr11:46486200-46525800 Weak transcription Fetal Brain Female brain
3 chr11:46486600-46518800 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr11:46490200-46525800 Weak transcription Aorta Aorta
5 chr11:46494800-46519800 Weak transcription Psoas Muscle Psoas
6 chr11:46497600-46537600 Weak transcription A549 lung
7 chr11:46503400-46563000 Weak transcription Placenta Amnion Placenta Amnion
8 chr11:46505000-46526800 Weak transcription H9 Cell Line embryonic stem cell
9 chr11:46506600-46526400 Weak transcription NHLF lung
10 chr11:46507600-46519000 Weak transcription Right Ventricle heart
11 chr11:46507800-46529600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr11:46507800-46529600 Weak transcription Stomach Mucosa stomach
13 chr11:46508200-46525600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
14 chr11:46509600-46537200 Strong transcription Primary T cells from cord blood blood
15 chr11:46510400-46526800 Weak transcription iPS-15b Cell Line embryonic stem cell
16 chr11:46511200-46516000 Strong transcription Primary B cells from cord blood blood
17 chr11:46511200-46516800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr11:46511200-46517000 Strong transcription Primary T helper naive cells fromperipheralblood blood
19 chr11:46511200-46517000 Strong transcription Fetal Thymus thymus
20 chr11:46511200-46517400 Strong transcription Primary T helper cells fromperipheralblood blood
21 chr11:46511200-46518200 Strong transcription Monocytes-CD14+_RO01746 blood
22 chr11:46511200-46519400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr11:46511200-46519800 Strong transcription Primary T regulatory cells fromperipheralblood blood
24 chr11:46511400-46516000 Strong transcription Liver Liver
25 chr11:46511400-46516400 Strong transcription HepG2 liver
26 chr11:46511400-46518400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr11:46511400-46519400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
28 chr11:46511600-46516600 Weak transcription K562 blood
29 chr11:46511800-46516000 Enhancers Fetal Kidney kidney
30 chr11:46512000-46520800 Strong transcription Primary B cells from peripheral blood blood
31 chr11:46512200-46516200 Strong transcription Primary T helper cells PMA-I stimulated --
32 chr11:46512200-46521000 Strong transcription Primary T cells fromperipheralblood blood
33 chr11:46512400-46527400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
34 chr11:46512600-46524200 Weak transcription HMEC breast
35 chr11:46512800-46516200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr11:46512800-46517200 Strong transcription GM12878-XiMat blood
37 chr11:46512800-46526800 Weak transcription H1 Cell Line embryonic stem cell
38 chr11:46513400-46516600 Strong transcription Breast Myoepithelial Primary Cells Breast
39 chr11:46513400-46517200 Strong transcription Primary monocytes fromperipheralblood blood
40 chr11:46513600-46529200 Weak transcription Brain Germinal Matrix brain
41 chr11:46513800-46520600 Strong transcription Dnd41 blood
42 chr11:46513800-46525800 Weak transcription Pancreas Pancrea
43 chr11:46513800-46527400 Weak transcription Colonic Mucosa Colon
44 chr11:46513800-46527600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
45 chr11:46514000-46516000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
46 chr11:46514000-46517000 Strong transcription Thymus Thymus
47 chr11:46514000-46518200 Strong transcription Fetal Adrenal Gland Adrenal Gland
48 chr11:46514000-46519000 Weak transcription Skeletal Muscle Male skeletal muscle
49 chr11:46514000-46525600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
50 chr11:46514200-46516000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --

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