Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10093154	0.89[CHB][hapmap];0.89[JPT][hapmap]
rs10112029	0.89[JPT][hapmap]
rs2346131	0.81[ASN][1000 genomes]
rs3101525	0.89[CHB][hapmap];0.89[JPT][hapmap]
rs3101529	0.89[CHB][hapmap];0.90[JPT][hapmap]
rs3101536	0.81[ASN][1000 genomes]
rs3101537	0.81[ASN][1000 genomes]
rs3101540	0.96[ASN][1000 genomes]
rs3101541	0.88[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs3110431	1.00[CHB][hapmap];0.94[JPT][hapmap]
rs3110437	0.84[CHB][hapmap];0.84[JPT][hapmap]
rs3110774	0.81[ASN][1000 genomes]
rs3110776	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs3110777	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3132804	0.88[CHB][hapmap];0.89[JPT][hapmap]
rs3134120	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs3134122	0.81[ASN][1000 genomes]
rs3134123	0.81[ASN][1000 genomes]
rs3134124	0.96[ASN][1000 genomes]
rs3134133	0.89[CHB][hapmap];0.89[JPT][hapmap]
rs3134134	0.89[CHB][hapmap];0.90[JPT][hapmap]
rs3134135	0.89[CHB][hapmap];0.90[JPT][hapmap]
rs3134136	0.89[CHB][hapmap];0.89[JPT][hapmap]
rs56063590	0.93[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv533134	chr8:107307812-107670002	Weak transcription Enhancers Strong transcription Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:107512400-107620200	Weak transcription	Aorta	Aorta
2	chr8:107590200-107601400	Weak transcription	Pancreas	Pancrea
3	chr8:107592400-107606600	Weak transcription	Cortex derived primary cultured neurospheres	brain
4	chr8:107594200-107601200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr8:107594800-107600600	Weak transcription	Fetal Intestine Large	intestine

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