Variant report

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr10:44136935-44137477	GM12878	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:44136981..44138656-chr10:44141418..44144179,3	MCF-7	breast:
2	chr10:44068167..44069924-chr10:44136851..44139304,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ZNF485-6	chr10:44134003-44137534	NONHSAT012980

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10736821	0.86[ASN][1000 genomes]
rs10751327	0.86[ASN][1000 genomes]
rs10751328	0.86[ASN][1000 genomes]
rs10751330	0.87[ASN][1000 genomes]
rs10751331	0.86[ASN][1000 genomes]
rs10793459	0.81[ASN][1000 genomes]
rs10793461	0.86[ASN][1000 genomes]
rs10793463	0.85[ASN][1000 genomes]
rs10899848	0.84[ASN][1000 genomes]
rs10899849	0.85[ASN][1000 genomes]
rs10899850	0.86[ASN][1000 genomes]
rs11238609	0.86[ASN][1000 genomes]
rs12248526	0.86[ASN][1000 genomes]
rs12254814	0.85[ASN][1000 genomes]
rs2484664	0.90[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2484665	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2484667	0.98[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2505644	0.94[ASN][1000 genomes]
rs3123657	0.94[ASN][1000 genomes]
rs3123661	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs3123671	0.95[ASN][1000 genomes]
rs3123676	0.87[AFR][1000 genomes];0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3123677	0.82[ASN][1000 genomes]
rs3128247	0.99[ASN][1000 genomes]
rs3128249	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9422395	0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9422564	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44135600-44142800	ZNF genes & repeats	Fetal Brain Female	brain
2	chr10:44136800-44141600	ZNF genes & repeats	Brain Inferior Temporal Lobe	brain
3	chr10:44136800-44142000	ZNF genes & repeats	Brain Germinal Matrix	brain
4	chr10:44136800-44142000	ZNF genes & repeats	Skeletal Muscle Male	skeletal muscle
5	chr10:44136800-44142200	ZNF genes & repeats	Brain Hippocampus Middle	brain
6	chr10:44136800-44142200	ZNF genes & repeats	Skeletal Muscle Female	skeletal muscle
7	chr10:44136800-44142400	ZNF genes & repeats	Liver	Liver
8	chr10:44136800-44142400	ZNF genes & repeats	HSMM	muscle
9	chr10:44136800-44143400	ZNF genes & repeats	Fetal Lung	lung
10	chr10:44137000-44137200	Weak transcription	Muscle Satellite Cultured Cells	--
11	chr10:44137000-44139400	Weak transcription	Stomach Mucosa	stomach
12	chr10:44137000-44142000	ZNF genes & repeats	Brain Substantia Nigra	brain
13	chr10:44137000-44143000	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell
14	chr10:44137000-44143400	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
15	chr10:44137000-44143600	ZNF genes & repeats	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

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