Variant report

Variant	rs33997479
Chromosome Location	chr8:49556443-49556444
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 41 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:41)

rs_ID	r²[population]
rs10086031	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10086847	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs10089017	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs10094884	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs10098811	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10107998	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs10429408	0.89[AMR][1000 genomes]
rs10504066	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs10957191	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs11992055	0.89[AMR][1000 genomes]
rs11994273	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12549717	0.98[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs13248205	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13251674	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13257444	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13275840	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13278011	0.98[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs13439150	0.97[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs1482264	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs16938259	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs16938260	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs16938290	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs16938363	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2046236	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs2170491	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs28496614	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs34036465	0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs35116039	0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs35306055	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs35379802	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs35545096	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs35564937	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs36071901	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs4873281	0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4873282	0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4873283	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4873284	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6988001	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs6989273	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs71511941	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs745488	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]

No data

Chromatin state (count:46 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:49551200-49560800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
2	chr8:49551200-49563400	Enhancers	Ovary	ovary
3	chr8:49553000-49560000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
4	chr8:49553400-49556800	Enhancers	Fetal Lung	lung
5	chr8:49553400-49556800	Enhancers	HSMMtube	muscle
6	chr8:49554000-49556800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
7	chr8:49554200-49556800	Enhancers	Fetal Stomach	stomach
8	chr8:49554400-49557200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
9	chr8:49554600-49556800	Enhancers	Fetal Heart	heart
10	chr8:49555000-49556800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
11	chr8:49555000-49556800	Enhancers	Breast Myoepithelial Primary Cells	Breast
12	chr8:49555200-49556800	Enhancers	Colon Smooth Muscle	Colon
13	chr8:49555200-49557000	Enhancers	Adipose Nuclei	Adipose
14	chr8:49555400-49556600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
15	chr8:49555400-49556800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
16	chr8:49555400-49556800	Enhancers	Duodenum Smooth Muscle	Duodenum
17	chr8:49555400-49556800	Enhancers	Osteobl	bone
18	chr8:49555600-49556600	Enhancers	Muscle Satellite Cultured Cells	--
19	chr8:49555600-49556800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
20	chr8:49555600-49556800	Enhancers	NHLF	lung
21	chr8:49555800-49556600	Weak transcription	Placenta Amnion	Placenta Amnion
22	chr8:49555800-49557000	Enhancers	Fetal Muscle Leg	muscle
23	chr8:49556000-49556600	Enhancers	Aorta	Aorta
24	chr8:49556000-49556600	Enhancers	NH-A	brain
25	chr8:49556000-49556800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
26	chr8:49556000-49556800	Enhancers	Rectal Smooth Muscle	rectum
27	chr8:49556000-49556800	Enhancers	Skeletal Muscle Male	skeletal muscle
28	chr8:49556000-49556800	Enhancers	Stomach Smooth Muscle	stomach
29	chr8:49556000-49556800	Enhancers	HSMM	muscle
30	chr8:49556000-49556800	Enhancers	NHDF-Ad	bronchial
31	chr8:49556000-49557000	Enhancers	Fetal Muscle Trunk	muscle
32	chr8:49556000-49557000	Enhancers	Placenta	Placenta
33	chr8:49556000-49557000	Enhancers	Pancreas	Pancrea
34	chr8:49556000-49557200	Enhancers	Right Ventricle	heart
35	chr8:49556200-49556600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
36	chr8:49556200-49556800	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
37	chr8:49556200-49557000	Enhancers	Left Ventricle	heart
38	chr8:49556200-49557200	Enhancers	Right Atrium	heart
39	chr8:49556400-49556600	Enhancers	HUES6 Cell Line	embryonic stem cell
40	chr8:49556400-49556600	Enhancers	Esophagus	oesophagus
41	chr8:49556400-49556600	Enhancers	Lung	lung
42	chr8:49556400-49556800	Enhancers	Liver	Liver
43	chr8:49556400-49556800	Enhancers	Skeletal Muscle Female	skeletal muscle
44	chr8:49556400-49557200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
45	chr8:49556400-49558600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
46	chr8:49556400-49559400	Weak transcription	Fetal Kidney	kidney

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