Variant report

Variant	rs1482264
Chromosome Location	chr8:49586975-49586976
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 42 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:42)

rs_ID	r²[population]
rs10086031	1.00[CEU][hapmap];0.85[CHB][hapmap];0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs10086847	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10089017	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10094884	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10097910	0.85[CEU][hapmap]
rs10098811	1.00[CEU][hapmap];0.85[CHB][hapmap];0.80[AFR][1000 genomes];0.98[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs10107998	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10429408	0.86[CHB][hapmap];0.90[JPT][hapmap];0.89[AMR][1000 genomes]
rs10504066	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10957191	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11992055	0.85[CHB][hapmap];0.89[JPT][hapmap];0.89[AMR][1000 genomes]
rs11994273	1.00[CEU][hapmap];0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12549717	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13248205	1.00[CEU][hapmap];0.85[CHB][hapmap];0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs13251674	1.00[CEU][hapmap];0.85[CHB][hapmap];0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs13257444	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs13275840	1.00[CEU][hapmap];0.85[CHB][hapmap];0.80[AFR][1000 genomes];0.97[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs13278011	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13439150	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs16938259	1.00[CEU][hapmap];0.85[CHB][hapmap];0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs16938260	1.00[CEU][hapmap];0.85[CHB][hapmap];0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs16938290	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs16938363	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2046236	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2170491	1.00[CEU][hapmap];0.85[CHB][hapmap];0.95[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs28496614	0.98[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs33997479	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs34036465	0.98[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs35116039	0.98[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs35306055	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs35379802	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs35545096	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs35564937	0.97[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs36071901	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4873281	1.00[CEU][hapmap];0.85[CHB][hapmap];0.98[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs4873282	0.98[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs4873283	1.00[CEU][hapmap];0.81[CHB][hapmap];0.97[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4873284	1.00[CEU][hapmap];0.85[CHB][hapmap];0.97[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs6988001	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6989273	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs71511941	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs745488	0.97[AMR][1000 genomes];0.85[EUR][1000 genomes]

No data

Chromatin state (count:56 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:49581200-49587800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
2	chr8:49582800-49587800	Enhancers	Lung	lung
3	chr8:49583600-49588200	Weak transcription	Small Intestine	intestine
4	chr8:49583600-49590000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr8:49583800-49587200	Enhancers	Right Atrium	heart
6	chr8:49584200-49587200	Weak transcription	Fetal Muscle Leg	muscle
7	chr8:49584200-49587600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
8	chr8:49584200-49588000	Enhancers	Fetal Stomach	stomach
9	chr8:49584400-49587000	Weak transcription	HUES64 Cell Line	embryonic stem cell
10	chr8:49584400-49587000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
11	chr8:49584400-49587400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
12	chr8:49584400-49590000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
13	chr8:49584600-49587600	Weak transcription	Fetal Kidney	kidney
14	chr8:49584600-49589600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
15	chr8:49585000-49587000	Enhancers	Placenta Amnion	Placenta Amnion
16	chr8:49585000-49588400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
17	chr8:49585200-49587600	Weak transcription	Gastric	stomach
18	chr8:49585200-49592000	Weak transcription	Skeletal Muscle Male	skeletal muscle
19	chr8:49585400-49592000	Weak transcription	Left Ventricle	heart
20	chr8:49585600-49587200	Enhancers	HMEC	breast
21	chr8:49585800-49587000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
22	chr8:49585800-49587600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
23	chr8:49585800-49588000	Enhancers	Placenta	Placenta
24	chr8:49585800-49588400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
25	chr8:49586000-49587000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
26	chr8:49586000-49587800	Enhancers	Fetal Heart	heart
27	chr8:49586200-49587400	Weak transcription	Fetal Brain Male	brain
28	chr8:49586200-49587800	Enhancers	NHLF	lung
29	chr8:49586200-49588000	Enhancers	Fetal Intestine Large	intestine
30	chr8:49586200-49588200	Enhancers	Colon Smooth Muscle	Colon
31	chr8:49586200-49588400	Enhancers	Ovary	ovary
32	chr8:49586200-49591800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
33	chr8:49586400-49587200	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
34	chr8:49586400-49587400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
35	chr8:49586400-49588200	Enhancers	Stomach Smooth Muscle	stomach
36	chr8:49586600-49587000	Enhancers	Adipose Nuclei	Adipose
37	chr8:49586600-49587200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
38	chr8:49586600-49587200	Flanking Active TSS	Fetal Lung	lung
39	chr8:49586600-49587800	Enhancers	ES-I3 Cell Line	embryonic stem cell
40	chr8:49586600-49587800	Enhancers	H1 Cell Line	embryonic stem cell
41	chr8:49586600-49587800	Enhancers	Duodenum Mucosa	Duodenum
42	chr8:49586600-49588000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
43	chr8:49586600-49588200	Enhancers	HUES6 Cell Line	embryonic stem cell
44	chr8:49586600-49588600	Enhancers	Brain Germinal Matrix	brain
45	chr8:49586600-49590800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
46	chr8:49586600-49591800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
47	chr8:49586600-49592000	Weak transcription	Primary monocytes fromperipheralblood	blood
48	chr8:49586800-49587400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
49	chr8:49586800-49587400	Weak transcription	Duodenum Smooth Muscle	Duodenum
50	chr8:49586800-49587600	Weak transcription	iPS-15b Cell Line	embryonic stem cell

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