Variant report

Variant	rs35564937
Chromosome Location	chr8:49548607-49548608
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:49319707..49321883-chr8:49548492..49551436,2	MCF-7	breast:
2	chr8:49518230..49520037-chr8:49547889..49550739,2	K562	blood:
3	chr8:49547940..49550013-chr8:49550346..49553182,2	K562	blood:

Extended variants
information (count: 41 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:41)

rs_ID	r²[population]
rs10086031	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10086847	0.97[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs10089017	0.97[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs10094884	0.97[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10098811	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10107998	0.97[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs10429408	0.86[AMR][1000 genomes]
rs10504066	0.97[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs10957191	0.97[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs11992055	0.86[AMR][1000 genomes]
rs11994273	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12549717	0.98[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs13248205	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13251674	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13257444	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13275840	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13278011	0.98[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs13439150	0.94[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs1482264	0.97[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs16938259	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs16938260	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs16938290	0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs16938363	0.97[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2046236	0.97[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2170491	0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs28496614	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs33997479	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs34036465	0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs35116039	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs35306055	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs35379802	0.97[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs35545096	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs36071901	0.97[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4873281	0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4873282	0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4873283	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4873284	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6988001	0.97[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs6989273	0.97[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs71511941	0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs745488	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:49534400-49556000	Weak transcription	Pancreas	Pancrea
2	chr8:49544400-49555400	Weak transcription	Osteobl	bone
3	chr8:49546600-49554400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
4	chr8:49547000-49548800	Weak transcription	Placenta Amnion	Placenta Amnion
5	chr8:49547200-49551200	Weak transcription	Ovary	ovary
6	chr8:49547400-49553400	Weak transcription	Fetal Lung	lung
7	chr8:49548000-49549400	ZNF genes & repeats	IMR90 fetal lung fibroblasts Cell Line	lung
8	chr8:49548200-49548800	ZNF genes & repeats	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
9	chr8:49548400-49551200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
10	chr8:49548600-49549400	ZNF genes & repeats	Foreskin Keratinocyte Primary Cells skin03	Skin
11	chr8:49548600-49551400	Enhancers	HMEC	breast

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