Variant report

Variant	rs34336834
Chromosome Location	chr5:41150789-41150790
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:41089324..41092275-chr5:41150039..41152049,2	K562	blood:

Extended variants
information (count: 54 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:54)

rs_ID	r²[population]
rs1008761	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1025043	0.93[AFR][1000 genomes];0.80[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10512757	0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10512762	0.94[AMR][1000 genomes];0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10512766	0.87[ASN][1000 genomes]
rs11748979	0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs13158601	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13158729	0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13159740	0.93[ASN][1000 genomes]
rs13167227	0.81[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13167951	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13173930	0.83[ASN][1000 genomes]
rs13174484	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs13177483	0.93[ASN][1000 genomes]
rs13182727	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13185550	0.81[AFR][1000 genomes];0.80[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs13186888	0.88[AFR][1000 genomes];0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13189407	0.93[AFR][1000 genomes];0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1423390	0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs17198998	0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs17201103	0.95[ASN][1000 genomes]
rs17258193	0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs17259287	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17260165	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17260228	0.93[AFR][1000 genomes];0.80[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17260948	0.90[ASN][1000 genomes]
rs1822822	0.91[ASN][1000 genomes]
rs34205640	0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs34305798	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs34675731	0.86[ASN][1000 genomes]
rs35179056	0.81[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs35786815	0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs35807549	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs35915011	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs35931290	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs35949425	0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs36183568	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs3792909	0.98[ASN][1000 genomes]
rs3792910	0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3805713	0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4552672	0.93[ASN][1000 genomes]
rs4642410	0.83[AFR][1000 genomes];0.82[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs62360805	0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs62361614	0.81[AFR][1000 genomes];0.80[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs66527047	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs6883180	0.80[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6898364	0.82[ASN][1000 genomes]
rs72753938	0.90[ASN][1000 genomes]
rs72753945	0.92[AFR][1000 genomes];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs749629	0.88[ASN][1000 genomes]
rs7723986	0.93[ASN][1000 genomes]
rs7727839	0.93[ASN][1000 genomes]
rs9292802	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9332457	0.93[ASN][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:41139800-41182000	Weak transcription	Left Ventricle	heart
2	chr5:41140200-41151800	Weak transcription	Pancreas	Pancrea
3	chr5:41141600-41156400	Strong transcription	Liver	Liver
4	chr5:41147600-41151600	Weak transcription	Aorta	Aorta
5	chr5:41148400-41151200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
6	chr5:41148600-41151000	Strong transcription	Fetal Intestine Small	intestine
7	chr5:41150200-41152400	Weak transcription	Fetal Intestine Large	intestine
8	chr5:41150600-41151600	Enhancers	Adipose Nuclei	Adipose
9	chr5:41150600-41152000	Enhancers	Ovary	ovary

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