Variant report

Variant	rs35807549
Chromosome Location	chr5:41106516-41106517
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 63 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:62)

rs_ID	r²[population]
rs1008761	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1025043	0.80[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10512757	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10512762	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10512766	0.80[ASN][1000 genomes]
rs11748979	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11750584	0.80[AMR][1000 genomes]
rs13158601	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs13158725	0.84[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs13158729	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs13159248	0.84[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs13159740	0.87[ASN][1000 genomes]
rs13167227	0.90[ASN][1000 genomes]
rs13167951	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs13173930	0.90[ASN][1000 genomes]
rs13174484	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs13177483	0.87[ASN][1000 genomes]
rs13182727	0.93[ASN][1000 genomes]
rs13185550	0.88[ASN][1000 genomes]
rs13186888	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs13189407	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1423390	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1423404	0.84[AMR][1000 genomes]
rs1423408	0.84[AMR][1000 genomes]
rs17198998	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17201103	0.88[ASN][1000 genomes]
rs17258193	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17259287	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17260165	0.81[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17260228	0.81[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17260948	0.83[ASN][1000 genomes]
rs1822822	0.85[ASN][1000 genomes]
rs34205640	0.88[ASN][1000 genomes]
rs34305798	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs34336834	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs35179056	0.85[ASN][1000 genomes]
rs35786815	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs35915011	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs35931290	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs35949425	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs36183568	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs3792909	0.91[ASN][1000 genomes]
rs3792910	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs3805713	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4552672	0.87[ASN][1000 genomes]
rs4642410	0.90[ASN][1000 genomes]
rs62360805	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs62360811	0.84[AMR][1000 genomes]
rs62361614	0.85[ASN][1000 genomes]
rs66527047	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs6883180	0.90[ASN][1000 genomes]
rs6883572	0.80[AMR][1000 genomes]
rs6898364	0.88[ASN][1000 genomes]
rs72753938	0.93[ASN][1000 genomes]
rs72753945	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs749629	0.81[ASN][1000 genomes]
rs7705375	0.80[AMR][1000 genomes]
rs7723986	0.87[ASN][1000 genomes]
rs7727839	0.87[ASN][1000 genomes]
rs9292802	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9332457	0.87[ASN][1000 genomes]
rs975226	0.80[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830268	chr5:40897361-41138366	Enhancers Weak transcription ZNF genes & repeats Active TSS Strong transcription Flanking Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:41104800-41111600	Weak transcription	Ovary	ovary

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