Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs11961442	0.81[EUR][1000 genomes]
rs11969940	0.81[EUR][1000 genomes]
rs13197670	0.98[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13212198	0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13212500	0.93[EUR][1000 genomes]
rs13214556	0.81[EUR][1000 genomes]
rs16893463	0.81[EUR][1000 genomes]
rs16893491	0.81[EUR][1000 genomes]
rs16893518	0.81[EUR][1000 genomes]
rs16893524	0.83[EUR][1000 genomes]
rs16893526	0.83[EUR][1000 genomes]
rs16893572	0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs16893614	1.00[EUR][1000 genomes]
rs1931644	0.98[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1931646	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1999630	0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs34411814	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs34723068	0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs35392002	0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs35419006	0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs35538583	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4476879	0.86[EUR][1000 genomes]
rs56021267	0.83[EUR][1000 genomes]
rs66652550	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67263687	0.95[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv870093	chrY:7286569-7512591	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription	TF binding region CpG island lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrY:7326800-7350200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
2	chrY:7337000-7360600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
3	chrY:7337800-7370200	Weak transcription	HSMM	muscle

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