Variant report

Variant rs35231921
Chromosome Location chr19:53360177-53360178
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:53345400-53360200 Weak transcription Fetal Heart heart
2 chr19:53345400-53360200 Weak transcription Hela-S3 cervix
3 chr19:53345800-53360400 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr19:53346400-53360400 Weak transcription Fetal Brain Male brain
5 chr19:53348000-53360200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr19:53348600-53360200 Weak transcription Stomach Mucosa stomach
7 chr19:53349200-53360200 Weak transcription Pancreatic Islets Pancreatic Islet
8 chr19:53351600-53360200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr19:53352000-53360200 Weak transcription Brain Substantia Nigra brain
10 chr19:53353600-53360200 Weak transcription Colon Smooth Muscle Colon
11 chr19:53355000-53360200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
12 chr19:53356600-53360200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
13 chr19:53356600-53360200 Weak transcription HSMM muscle
14 chr19:53357400-53360200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
15 chr19:53357400-53360200 Weak transcription Ovary ovary
16 chr19:53357400-53360200 Weak transcription Small Intestine intestine
17 chr19:53357600-53360200 Weak transcription Esophagus oesophagus
18 chr19:53357600-53360200 Weak transcription Fetal Muscle Trunk muscle
19 chr19:53357600-53360200 Weak transcription Gastric stomach
20 chr19:53357600-53360200 Weak transcription Skeletal Muscle Female skeletal muscle
21 chr19:53357600-53360400 Weak transcription Aorta Aorta
22 chr19:53357600-53360400 Weak transcription Fetal Kidney kidney
23 chr19:53357600-53360400 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr19:53357600-53360400 Weak transcription Spleen Spleen
25 chr19:53357800-53360200 Weak transcription Pancreas Pancrea
26 chr19:53357800-53360200 Weak transcription Placenta Amnion Placenta Amnion
27 chr19:53358000-53360200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
28 chr19:53358000-53360200 Weak transcription HSMMtube muscle
29 chr19:53358200-53360200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr19:53358800-53361200 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr19:53359000-53360200 Enhancers Primary Natural Killer cells fromperipheralblood blood
32 chr19:53359000-53360200 Enhancers Primary T killer memory cells from peripheral blood blood
33 chr19:53359200-53360200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr19:53359600-53361000 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
35 chr19:53359800-53360400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr19:53359800-53361000 Active TSS Colonic Mucosa Colon
37 chr19:53359800-53361200 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
38 chr19:53359800-53361200 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr19:53360000-53360200 Enhancers Primary monocytes fromperipheralblood blood
40 chr19:53360000-53360200 Enhancers Primary neutrophils fromperipheralblood blood
41 chr19:53360000-53360200 Enhancers Primary B cells from peripheral blood blood
42 chr19:53360000-53360200 Flanking Active TSS Primary hematopoietic stem cells blood
43 chr19:53360000-53360200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
44 chr19:53360000-53360200 Enhancers Primary T helper naive cells from peripheral blood blood
45 chr19:53360000-53360200 Enhancers Primary T helper naive cells fromperipheralblood blood
46 chr19:53360000-53360200 Active TSS Primary T helper 17 cells PMA-I stimulated --
47 chr19:53360000-53360200 Enhancers Primary T killer naive cells fromperipheralblood blood
48 chr19:53360000-53360200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr19:53360000-53360200 Flanking Active TSS Adipose Nuclei Adipose
50 chr19:53360000-53360200 Enhancers Brain Anterior Caudate brain

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