Variant report

Variant rs35901334
Chromosome Location chr19:53360248-53360249
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:53345800-53360400 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr19:53346400-53360400 Weak transcription Fetal Brain Male brain
3 chr19:53357600-53360400 Weak transcription Aorta Aorta
4 chr19:53357600-53360400 Weak transcription Fetal Kidney kidney
5 chr19:53357600-53360400 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr19:53357600-53360400 Weak transcription Spleen Spleen
7 chr19:53358800-53361200 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr19:53359600-53361000 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
9 chr19:53359800-53360400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
10 chr19:53359800-53361000 Active TSS Colonic Mucosa Colon
11 chr19:53359800-53361200 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
12 chr19:53359800-53361200 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr19:53360000-53360400 Flanking Active TSS Primary B cells from cord blood blood
14 chr19:53360000-53360400 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
15 chr19:53360000-53360400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
16 chr19:53360000-53360400 Flanking Active TSS Skeletal Muscle Male skeletal muscle
17 chr19:53360000-53360400 Flanking Active TSS NH-A brain
18 chr19:53360000-53360600 Active TSS iPS-18 Cell Line embryonic stem cell
19 chr19:53360000-53360600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr19:53360000-53361000 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
21 chr19:53360000-53361000 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr19:53360000-53361000 Active TSS Breast Myoepithelial Primary Cells Breast
23 chr19:53360000-53361000 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr19:53360000-53361000 Active TSS Primary T cells from cord blood blood
25 chr19:53360000-53361000 Active TSS Primary T cells fromperipheralblood blood
26 chr19:53360000-53361000 Active TSS Primary T helper cells PMA-I stimulated --
27 chr19:53360000-53361000 Active TSS Primary T helper cells fromperipheralblood blood
28 chr19:53360000-53361000 Active TSS Cortex derived primary cultured neurospheres brain
29 chr19:53360000-53361000 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
30 chr19:53360000-53361000 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr19:53360000-53361000 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
32 chr19:53360000-53361000 Active TSS Fetal Muscle Leg muscle
33 chr19:53360000-53361000 Active TSS Placenta Placenta
34 chr19:53360000-53361000 Active TSS HepG2 liver
35 chr19:53360000-53361000 Active TSS HUVEC blood vessel
36 chr19:53360000-53361000 Active TSS K562 blood
37 chr19:53360000-53361000 Active TSS Monocytes-CD14+_RO01746 blood
38 chr19:53360000-53361200 Active TSS H1 Cell Line embryonic stem cell
39 chr19:53360000-53361200 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
40 chr19:53360000-53361200 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr19:53360000-53361200 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
42 chr19:53360000-53361200 Active TSS iPS-20b Cell Line embryonic stem cell
43 chr19:53360000-53361200 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr19:53360000-53361200 Active TSS Primary T regulatory cells fromperipheralblood blood
45 chr19:53360000-53361200 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
46 chr19:53360000-53361200 Active TSS Muscle Satellite Cultured Cells --
47 chr19:53360000-53361200 Active TSS Duodenum Mucosa Duodenum
48 chr19:53360000-53361200 Active TSS Fetal Brain Female brain
49 chr19:53360000-53361200 Active TSS Fetal Lung lung
50 chr19:53360000-53361200 Active TSS Fetal Stomach stomach

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