The 2.0 version of rSNPBase

Variant report

Variant rs35865759
Chromosome Location chr11:16924812-16924813
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:16914000-16927400 Weak transcription HSMMtube muscle
2 chr11:16916000-16931000 Weak transcription Spleen Spleen
3 chr11:16919400-16927000 Weak transcription Fetal Muscle Leg muscle
4 chr11:16919600-16925400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr11:16919800-16933600 Weak transcription Fetal Kidney kidney
6 chr11:16920400-16927000 Weak transcription Right Atrium heart
7 chr11:16921600-16927000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr11:16921600-16927200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
9 chr11:16921800-16926600 Weak transcription Gastric stomach
10 chr11:16921800-16926600 Weak transcription Pancreas Pancrea
11 chr11:16921800-16927000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr11:16922000-16934000 Weak transcription HepG2 liver
13 chr11:16922200-16927200 Weak transcription Fetal Lung lung
14 chr11:16922800-16925600 Enhancers HMEC breast
15 chr11:16923000-16925800 Enhancers Rectal Mucosa Donor 31 rectum
16 chr11:16923000-16926000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr11:16923200-16925800 Enhancers Primary B cells from peripheral blood blood
18 chr11:16923400-16925000 Enhancers Muscle Satellite Cultured Cells --
19 chr11:16923400-16925000 Enhancers NHEK skin
20 chr11:16923400-16925600 Flanking Active TSS GM12878-XiMat blood
21 chr11:16923400-16926000 Enhancers Stomach Mucosa stomach
22 chr11:16923400-16927400 Enhancers Fetal Intestine Large intestine
23 chr11:16923600-16925400 Enhancers Primary T helper cells PMA-I stimulated --
24 chr11:16923600-16925600 Enhancers Sigmoid Colon Sigmoid Colon
25 chr11:16923600-16925800 Enhancers Fetal Intestine Small intestine
26 chr11:16923800-16927800 Enhancers Fetal Heart heart
27 chr11:16924200-16925000 Enhancers Primary T regulatory cells fromperipheralblood blood
28 chr11:16924200-16925000 Enhancers Adipose Nuclei Adipose
29 chr11:16924200-16925400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr11:16924200-16925600 Enhancers Primary hematopoietic stem cells short term culture blood
31 chr11:16924200-16926600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr11:16924200-16927200 Weak transcription iPS-20b Cell Line embryonic stem cell
33 chr11:16924400-16925000 Enhancers Primary hematopoietic stem cells blood
34 chr11:16924400-16925000 Enhancers Primary T helper cells fromperipheralblood blood
35 chr11:16924400-16925200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr11:16924600-16925000 Enhancers Primary neutrophils fromperipheralblood blood
37 chr11:16924600-16925000 Enhancers Primary T helper 17 cells PMA-I stimulated --
38 chr11:16924600-16925000 Enhancers Pancreatic Islets Pancreatic Islet
39 chr11:16924800-16925000 Enhancers Esophagus oesophagus
40 chr11:16924800-16925000 Enhancers Fetal Adrenal Gland Adrenal Gland
41 chr11:16924800-16925200 Enhancers Colonic Mucosa Colon
42 chr11:16924800-16925200 Flanking Active TSS Duodenum Mucosa Duodenum
43 chr11:16924800-16925200 Enhancers Left Ventricle heart
44 chr11:16924800-16925600 Enhancers HUVEC blood vessel
45 chr11:16924800-16925800 Enhancers Small Intestine intestine
46 chr11:16924800-16926600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr11:16924800-16927000 Weak transcription Placenta Amnion Placenta Amnion
48 chr11:16924800-16927000 Weak transcription A549 lung
49 chr11:16924800-16927400 Weak transcription Duodenum Smooth Muscle Duodenum

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Last update: Aug 31, 2015