The 2.0 version of rSNPBase

Variant report

Variant rs41292023
Chromosome Location chr12:64879436-64879437
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:64847000-64900800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr12:64853400-64896800 Weak transcription iPS-15b Cell Line embryonic stem cell
3 chr12:64854000-64886600 Weak transcription Primary T killer naive cells fromperipheralblood blood
4 chr12:64854000-64893000 Weak transcription Primary T helper naive cells fromperipheralblood blood
5 chr12:64854400-64897200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
6 chr12:64854600-64894000 Strong transcription Primary monocytes fromperipheralblood blood
7 chr12:64854800-64893600 Strong transcription Monocytes-CD14+_RO01746 blood
8 chr12:64855600-64887600 Strong transcription Dnd41 blood
9 chr12:64862400-64885800 Strong transcription HSMM muscle
10 chr12:64862800-64896800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr12:64863000-64882400 Weak transcription Primary T helper naive cells from peripheral blood blood
12 chr12:64863400-64879800 Weak transcription Brain Angular Gyrus brain
13 chr12:64864000-64887000 Weak transcription Colonic Mucosa Colon
14 chr12:64866000-64897000 Weak transcription Esophagus oesophagus
15 chr12:64869200-64883400 Weak transcription Gastric stomach
16 chr12:64869200-64883800 Weak transcription Aorta Aorta
17 chr12:64869400-64879600 Weak transcription Skeletal Muscle Male skeletal muscle
18 chr12:64869400-64880200 Weak transcription Pancreas Pancrea
19 chr12:64869400-64880200 Weak transcription Spleen Spleen
20 chr12:64869600-64879600 Weak transcription Brain Substantia Nigra brain
21 chr12:64869600-64880000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
22 chr12:64869600-64880200 Weak transcription Lung lung
23 chr12:64869600-64880200 Weak transcription Right Ventricle heart
24 chr12:64869600-64881000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
25 chr12:64869600-64883800 Weak transcription H9 Cell Line embryonic stem cell
26 chr12:64869600-64884000 Weak transcription Brain Germinal Matrix brain
27 chr12:64869600-64892000 Weak transcription Small Intestine intestine
28 chr12:64869600-64893000 Weak transcription Fetal Brain Male brain
29 chr12:64869800-64880000 Weak transcription NHEK skin
30 chr12:64869800-64881400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
31 chr12:64869800-64883800 Weak transcription ES-I3 Cell Line embryonic stem cell
32 chr12:64869800-64888600 Weak transcription Primary T killer memory cells from peripheral blood blood
33 chr12:64869800-64895400 Weak transcription Fetal Kidney kidney
34 chr12:64870000-64882400 Weak transcription Placenta Amnion Placenta Amnion
35 chr12:64870000-64883800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
36 chr12:64870000-64893600 Weak transcription Fetal Heart heart
37 chr12:64870400-64882400 Weak transcription Fetal Intestine Small intestine
38 chr12:64871000-64886000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr12:64871000-64888400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr12:64871000-64896000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr12:64871000-64908200 Weak transcription Psoas Muscle Psoas
42 chr12:64871200-64879600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
43 chr12:64871200-64879800 Weak transcription H1 Cell Line embryonic stem cell
44 chr12:64871200-64881200 Weak transcription Cortex derived primary cultured neurospheres brain
45 chr12:64871200-64895000 Strong transcription HUES6 Cell Line embryonic stem cell
46 chr12:64871200-64897000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr12:64872200-64896200 Strong transcription Liver Liver
48 chr12:64872400-64882800 Strong transcription Primary B cells from cord blood blood
49 chr12:64872400-64895600 Strong transcription HUES64 Cell Line embryonic stem cell
50 chr12:64872400-64895800 Strong transcription HUES48 Cell Line embryonic stem cell

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Last update: Aug 31, 2015