Variant report

Variant	rs73120375
Chromosome Location	chr12:64859793-64859794
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr12:64858464..64860216-chr12:64861710..64863485,2	K562	blood:
2	chr12:64853450..64857742-chr12:64858532..64865395,7	K562	blood:
3	chr12:64845307..64847310-chr12:64858743..64861509,3	MCF-7	breast:
4	chr12:64858092..64860565-chr12:64880888..64883777,2	K562	blood:

Variant related genes	Relation type
ENSG00000183735	Chromatin interaction

Extended variants
information (count: 41 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:41)

rs_ID	r²[population]
rs11829120	0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11837890	0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4075094	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs41292023	0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55654954	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55690537	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs55999447	0.83[AFR][1000 genomes];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs56198126	1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56326550	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58143737	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs60358746	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60520114	0.94[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs61396007	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61931543	0.83[AFR][1000 genomes];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs61931544	0.83[AFR][1000 genomes];0.85[AMR][1000 genomes];0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs61931545	0.83[AFR][1000 genomes];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs61931549	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs61931550	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs61931552	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs61931555	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs61931557	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs61931558	0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs61933191	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61933192	0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61933195	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61933196	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61933198	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61933199	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61933200	0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61933201	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61933202	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61933204	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61933205	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs61933207	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61933209	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61933211	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61933212	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7303577	0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73120383	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs73122367	1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7488918	0.94[AFR][1000 genomes];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]

No data

Chromatin state (count:125 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:64846800-64862600	Weak transcription	Pancreas	Pancrea
2	chr12:64847000-64860400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
3	chr12:64847000-64862600	Weak transcription	H9 Cell Line	embryonic stem cell
4	chr12:64847000-64862600	Weak transcription	Right Ventricle	heart
5	chr12:64847000-64900800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr12:64847200-64862600	Weak transcription	Fetal Brain Male	brain
7	chr12:64847200-64864200	Weak transcription	Fetal Heart	heart
8	chr12:64847600-64861800	Weak transcription	Fetal Brain Female	brain
9	chr12:64847800-64861600	Weak transcription	Fetal Kidney	kidney
10	chr12:64847800-64862800	Weak transcription	Brain Germinal Matrix	brain
11	chr12:64849000-64869000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr12:64849200-64869200	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
13	chr12:64853000-64862600	Weak transcription	Spleen	Spleen
14	chr12:64853000-64868600	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
15	chr12:64853200-64871600	Strong transcription	Placenta	Placenta
16	chr12:64853400-64862400	Weak transcription	Gastric	stomach
17	chr12:64853400-64862600	Weak transcription	Aorta	Aorta
18	chr12:64853400-64862600	Weak transcription	Colonic Mucosa	Colon
19	chr12:64853400-64862800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
20	chr12:64853400-64864400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
21	chr12:64853400-64866200	Weak transcription	Small Intestine	intestine
22	chr12:64853400-64868600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
23	chr12:64853400-64868600	Weak transcription	Placenta Amnion	Placenta Amnion
24	chr12:64853400-64869000	Strong transcription	HUES64 Cell Line	embryonic stem cell
25	chr12:64853400-64870200	Weak transcription	Thymus	Thymus
26	chr12:64853400-64896800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
27	chr12:64853600-64862600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
28	chr12:64853600-64862600	Weak transcription	Psoas Muscle	Psoas
29	chr12:64853600-64862600	Weak transcription	Rectal Smooth Muscle	rectum
30	chr12:64853600-64870200	Weak transcription	Fetal Thymus	thymus
31	chr12:64853800-64865400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
32	chr12:64853800-64868400	Weak transcription	Pancreatic Islets	Pancreatic Islet
33	chr12:64854000-64869000	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
34	chr12:64854000-64875800	Weak transcription	Stomach Mucosa	stomach
35	chr12:64854000-64886600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
36	chr12:64854000-64893000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
37	chr12:64854200-64862200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
38	chr12:64854200-64862600	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
39	chr12:64854200-64871400	Strong transcription	Fetal Intestine Large	intestine
40	chr12:64854200-64872800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
41	chr12:64854400-64869000	Strong transcription	Primary hematopoietic stem cells short term culture	blood
42	chr12:64854400-64897200	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
43	chr12:64854600-64894000	Strong transcription	Primary monocytes fromperipheralblood	blood
44	chr12:64854800-64893600	Strong transcription	Monocytes-CD14+_RO01746	blood
45	chr12:64855200-64868600	Strong transcription	HUES6 Cell Line	embryonic stem cell
46	chr12:64855200-64869200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
47	chr12:64855200-64869600	Strong transcription	HUVEC	blood vessel
48	chr12:64855200-64871200	Strong transcription	H1 Cell Line	embryonic stem cell
49	chr12:64855400-64859800	Strong transcription	Stomach Smooth Muscle	stomach
50	chr12:64855400-64866000	Strong transcription	Primary T helper cells fromperipheralblood	blood

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