Variant report

Variant	rs73120383
Chromosome Location	chr12:64869137-64869138
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr12:64869134..64870653-chr12:64873170..64875671,2	MCF-7	breast:
2	chr12:64843560..64849494-chr12:64862941..64869931,10	MCF-7	breast:

Variant related genes	Relation type
ENSG00000183735	Chromatin interaction

Extended variants
information (count: 41 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:41)

rs_ID	r²[population]
rs11829120	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11837890	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4075094	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs41292023	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs55654954	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs55690537	0.91[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs55999447	0.82[EUR][1000 genomes]
rs56198126	0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs56326550	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs58143737	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs60358746	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs60520114	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs61396007	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs61931543	0.82[EUR][1000 genomes]
rs61931544	0.84[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs61931545	0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs61931549	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs61931550	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs61931552	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs61931555	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs61931557	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs61931558	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs61933191	0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs61933192	0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs61933195	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs61933196	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs61933198	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs61933199	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs61933200	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs61933201	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs61933202	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs61933204	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs61933205	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs61933207	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs61933209	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs61933211	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs61933212	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7303577	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs73120375	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs73122367	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7488918	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]

No data

Chromatin state (count:123 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:64847000-64900800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr12:64849200-64869200	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr12:64853200-64871600	Strong transcription	Placenta	Placenta
4	chr12:64853400-64870200	Weak transcription	Thymus	Thymus
5	chr12:64853400-64896800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
6	chr12:64853600-64870200	Weak transcription	Fetal Thymus	thymus
7	chr12:64854000-64875800	Weak transcription	Stomach Mucosa	stomach
8	chr12:64854000-64886600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
9	chr12:64854000-64893000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
10	chr12:64854200-64871400	Strong transcription	Fetal Intestine Large	intestine
11	chr12:64854200-64872800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
12	chr12:64854400-64897200	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
13	chr12:64854600-64894000	Strong transcription	Primary monocytes fromperipheralblood	blood
14	chr12:64854800-64893600	Strong transcription	Monocytes-CD14+_RO01746	blood
15	chr12:64855200-64869200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
16	chr12:64855200-64869600	Strong transcription	HUVEC	blood vessel
17	chr12:64855200-64871200	Strong transcription	H1 Cell Line	embryonic stem cell
18	chr12:64855400-64871000	Strong transcription	Primary neutrophils fromperipheralblood	blood
19	chr12:64855400-64871400	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
20	chr12:64855600-64887600	Strong transcription	Dnd41	blood
21	chr12:64856600-64871200	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
22	chr12:64857000-64869200	Strong transcription	Liver	Liver
23	chr12:64857600-64870000	Strong transcription	Osteobl	bone
24	chr12:64857800-64869200	Strong transcription	iPS-20b Cell Line	embryonic stem cell
25	chr12:64857800-64869800	Strong transcription	NH-A	brain
26	chr12:64858000-64869200	Strong transcription	Primary B cells from peripheral blood	blood
27	chr12:64858000-64870200	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
28	chr12:64858000-64871400	Strong transcription	Muscle Satellite Cultured Cells	--
29	chr12:64858200-64870000	Strong transcription	Primary B cells from cord blood	blood
30	chr12:64858200-64871800	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
31	chr12:64858200-64874600	Strong transcription	Duodenum Mucosa	Duodenum
32	chr12:64858400-64869200	Strong transcription	iPS-18 Cell Line	embryonic stem cell
33	chr12:64858400-64869200	Strong transcription	Duodenum Smooth Muscle	Duodenum
34	chr12:64858400-64869800	Strong transcription	Brain Hippocampus Middle	brain
35	chr12:64858400-64871000	Strong transcription	Primary T cells fromperipheralblood	blood
36	chr12:64858400-64877800	Strong transcription	Rectal Mucosa Donor 29	rectum
37	chr12:64861400-64869200	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
38	chr12:64861600-64870400	Strong transcription	Fetal Intestine Small	intestine
39	chr12:64862400-64869600	Strong transcription	Ovary	ovary
40	chr12:64862400-64872000	Strong transcription	Primary hematopoietic stem cells	blood
41	chr12:64862400-64885800	Strong transcription	HSMM	muscle
42	chr12:64862600-64869800	Strong transcription	NHLF	lung
43	chr12:64862800-64869600	Strong transcription	Brain Germinal Matrix	brain
44	chr12:64862800-64896800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
45	chr12:64863000-64882400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
46	chr12:64863400-64879800	Weak transcription	Brain Angular Gyrus	brain
47	chr12:64864000-64869200	Weak transcription	Rectal Smooth Muscle	rectum
48	chr12:64864000-64887000	Weak transcription	Colonic Mucosa	Colon
49	chr12:64864200-64872200	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
50	chr12:64864800-64869600	Strong transcription	Adipose Nuclei	Adipose

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