The 2.0 version of rSNPBase

Variant report

Variant rs451829
Chromosome Location chr6:88041919-88041920
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:88033000-88043600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
2 chr6:88033000-88043600 Weak transcription Fetal Intestine Small intestine
3 chr6:88033000-88043600 Weak transcription Spleen Spleen
4 chr6:88033000-88049000 Weak transcription Brain Inferior Temporal Lobe brain
5 chr6:88033000-88055200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr6:88033200-88042800 Weak transcription Fetal Thymus thymus
7 chr6:88033200-88043000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr6:88033200-88043400 Weak transcription Primary T cells from cord blood blood
9 chr6:88033200-88043600 Weak transcription Primary T helper naive cells fromperipheralblood blood
10 chr6:88033200-88043600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
11 chr6:88033200-88043600 Weak transcription Pancreas Pancrea
12 chr6:88033200-88045200 Weak transcription Stomach Smooth Muscle stomach
13 chr6:88033200-88045400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr6:88033200-88048000 Weak transcription Fetal Adrenal Gland Adrenal Gland
15 chr6:88033200-88056400 Weak transcription Liver Liver
16 chr6:88033200-88062200 Weak transcription Breast Myoepithelial Primary Cells Breast
17 chr6:88035800-88043400 Weak transcription Primary hematopoietic stem cells blood
18 chr6:88038800-88042600 Weak transcription Primary hematopoietic stem cells short term culture blood
19 chr6:88039000-88042400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
20 chr6:88039000-88042400 Weak transcription iPS-18 Cell Line embryonic stem cell
21 chr6:88039000-88042800 Weak transcription ES-WA7 Cell Line embryonic stem cell
22 chr6:88039000-88042800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr6:88039000-88044200 Weak transcription Hela-S3 cervix
24 chr6:88039000-88051400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
25 chr6:88039000-88068400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr6:88039000-88078400 Weak transcription Fetal Stomach stomach
27 chr6:88039200-88042400 Weak transcription H9 Cell Line embryonic stem cell
28 chr6:88039200-88042600 Weak transcription iPS-20b Cell Line embryonic stem cell
29 chr6:88039200-88042800 Weak transcription HUES48 Cell Line embryonic stem cell
30 chr6:88039200-88046000 Weak transcription HUES64 Cell Line embryonic stem cell
31 chr6:88039400-88042400 Weak transcription HUES6 Cell Line embryonic stem cell
32 chr6:88039400-88042800 Weak transcription H1 Cell Line embryonic stem cell
33 chr6:88039400-88047800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
34 chr6:88039400-88061200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr6:88039600-88046000 Weak transcription ES-I3 Cell Line embryonic stem cell
36 chr6:88039800-88042400 Weak transcription iPS-15b Cell Line embryonic stem cell
37 chr6:88039800-88044400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr6:88039800-88051000 Weak transcription GM12878-XiMat blood
39 chr6:88040200-88075800 Weak transcription Fetal Muscle Trunk muscle
40 chr6:88040600-88116800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
41 chr6:88040800-88043200 Weak transcription Primary neutrophils fromperipheralblood blood
42 chr6:88040800-88052600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
43 chr6:88041000-88043400 Weak transcription Primary T killer memory cells from peripheral blood blood
44 chr6:88041000-88044400 Weak transcription Primary B cells from cord blood blood
45 chr6:88041400-88043000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015