The 2.0 version of rSNPBase

Variant report

Variant rs12664578
Chromosome Location chr6:87895375-87895376
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:87867000-87895600 Weak transcription HSMM muscle
2 chr6:87867000-87915600 Weak transcription NH-A brain
3 chr6:87868000-87933000 Weak transcription Hela-S3 cervix
4 chr6:87874400-87924200 Weak transcription Fetal Kidney kidney
5 chr6:87875000-87910400 Weak transcription K562 blood
6 chr6:87879800-87923000 Weak transcription Esophagus oesophagus
7 chr6:87880600-87906000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
8 chr6:87881400-87926200 Weak transcription Liver Liver
9 chr6:87881800-87909400 Weak transcription Fetal Brain Male brain
10 chr6:87882000-87899400 Weak transcription Duodenum Mucosa Duodenum
11 chr6:87882200-87896400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr6:87883400-87926200 Weak transcription Fetal Lung lung
13 chr6:87883800-87897600 Weak transcription Rectal Smooth Muscle rectum
14 chr6:87884000-87906000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
15 chr6:87884000-87964400 Weak transcription NHEK skin
16 chr6:87884600-87897600 Weak transcription Colon Smooth Muscle Colon
17 chr6:87884600-87899400 Weak transcription Duodenum Smooth Muscle Duodenum
18 chr6:87887800-87896800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr6:87888200-87964200 Weak transcription HSMMtube muscle
20 chr6:87889800-87926400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
21 chr6:87890200-87905800 Weak transcription Brain Hippocampus Middle brain
22 chr6:87890200-87906000 Weak transcription Brain Cingulate Gyrus brain
23 chr6:87890200-87909400 Weak transcription Brain Substantia Nigra brain
24 chr6:87890400-87895600 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr6:87890400-87895800 Weak transcription Brain Anterior Caudate brain
26 chr6:87890400-87898400 Weak transcription Brain Inferior Temporal Lobe brain
27 chr6:87890800-87909600 Weak transcription Brain Germinal Matrix brain
28 chr6:87890800-87910000 Weak transcription Right Ventricle heart
29 chr6:87890800-87933000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr6:87891000-87902800 Weak transcription Pancreas Pancrea
31 chr6:87891000-87920000 Weak transcription Placenta Placenta
32 chr6:87891000-87956000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr6:87891200-87895800 Weak transcription Rectal Mucosa Donor 31 rectum
34 chr6:87891200-87897400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
35 chr6:87891200-87897600 Weak transcription Stomach Smooth Muscle stomach
36 chr6:87891200-87913000 Weak transcription Lung lung
37 chr6:87891200-87929200 Weak transcription Thymus Thymus
38 chr6:87891400-87895600 Weak transcription Primary T helper cells fromperipheralblood blood
39 chr6:87891400-87912800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr6:87891400-87932600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
41 chr6:87892000-87895600 Weak transcription Fetal Brain Female brain
42 chr6:87892000-87896200 Weak transcription Fetal Muscle Leg muscle
43 chr6:87892000-87896400 Weak transcription Primary T helper naive cells from peripheral blood blood
44 chr6:87892000-87897200 Weak transcription H1 Cell Line embryonic stem cell
45 chr6:87892000-87897400 Weak transcription Primary T killer memory cells from peripheral blood blood
46 chr6:87892000-87923000 Weak transcription Cortex derived primary cultured neurospheres brain
47 chr6:87892400-87899400 Weak transcription Primary T killer naive cells fromperipheralblood blood
48 chr6:87892800-87895800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
49 chr6:87892800-87896400 Weak transcription Primary T helper naive cells fromperipheralblood blood
50 chr6:87892800-87896400 Genic enhancers Primary T helper cells PMA-I stimulated --

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015