The 2.0 version of rSNPBase

Variant report

Variant rs6921619
Chromosome Location chr6:87875868-87875869
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:113 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:87866600-87877000 Weak transcription Brain Inferior Temporal Lobe brain
2 chr6:87866600-87878200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
3 chr6:87866600-87879000 Weak transcription Esophagus oesophagus
4 chr6:87866600-87880000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
5 chr6:87866600-87883600 Weak transcription Right Ventricle heart
6 chr6:87866600-87883600 Weak transcription Skeletal Muscle Male skeletal muscle
7 chr6:87866600-87885400 Enhancers Primary T helper naive cells fromperipheralblood blood
8 chr6:87866600-87886000 Weak transcription Fetal Muscle Trunk muscle
9 chr6:87866600-87886600 Weak transcription Aorta Aorta
10 chr6:87866600-87889800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr6:87866600-87890000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr6:87866600-87890200 Weak transcription Fetal Muscle Leg muscle
13 chr6:87866800-87876200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr6:87867000-87876000 Weak transcription H9 Cell Line embryonic stem cell
15 chr6:87867000-87876200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr6:87867000-87876800 Weak transcription ES-I3 Cell Line embryonic stem cell
17 chr6:87867000-87883400 Weak transcription Fetal Adrenal Gland Adrenal Gland
18 chr6:87867000-87886000 Weak transcription Monocytes-CD14+_RO01746 blood
19 chr6:87867000-87895600 Weak transcription HSMM muscle
20 chr6:87867000-87915600 Weak transcription NH-A brain
21 chr6:87867200-87876200 Weak transcription NHEK skin
22 chr6:87867200-87883200 Weak transcription HMEC breast
23 chr6:87867200-87893400 Weak transcription Adipose Nuclei Adipose
24 chr6:87867400-87876200 Weak transcription Muscle Satellite Cultured Cells --
25 chr6:87867400-87880800 Weak transcription Liver Liver
26 chr6:87867400-87881400 Weak transcription Duodenum Mucosa Duodenum
27 chr6:87867800-87876000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr6:87867800-87877400 Weak transcription Primary neutrophils fromperipheralblood blood
29 chr6:87867800-87879400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr6:87867800-87881000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr6:87867800-87883000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr6:87867800-87883400 Weak transcription Primary hematopoietic stem cells blood
33 chr6:87867800-87885800 Weak transcription Fetal Thymus thymus
34 chr6:87867800-87886400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
35 chr6:87868000-87933000 Weak transcription Hela-S3 cervix
36 chr6:87868200-87877600 Enhancers Primary T helper cells PMA-I stimulated --
37 chr6:87868200-87886000 Weak transcription Thymus Thymus
38 chr6:87868200-87889600 Weak transcription Rectal Mucosa Donor 29 rectum
39 chr6:87868400-87878800 Weak transcription Lung lung
40 chr6:87868400-87879400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr6:87868400-87879400 Weak transcription Fetal Stomach stomach
42 chr6:87868400-87880000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
43 chr6:87868400-87883600 Weak transcription Small Intestine intestine
44 chr6:87868600-87889800 Weak transcription Fetal Intestine Large intestine
45 chr6:87868800-87878000 Enhancers Primary T regulatory cells fromperipheralblood blood
46 chr6:87868800-87881400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
47 chr6:87869000-87882800 Weak transcription Primary B cells from cord blood blood
48 chr6:87869000-87885200 Weak transcription Placenta Placenta
49 chr6:87869400-87885800 Enhancers Primary T helper cells fromperipheralblood blood
50 chr6:87869600-87878800 Weak transcription Fetal Intestine Small intestine

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Last update: Aug 31, 2015