The 2.0 version of rSNPBase

Variant report

Variant rs6454592
Chromosome Location chr6:87903684-87903685
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:87867000-87915600 Weak transcription NH-A brain
2 chr6:87868000-87933000 Weak transcription Hela-S3 cervix
3 chr6:87874400-87924200 Weak transcription Fetal Kidney kidney
4 chr6:87875000-87910400 Weak transcription K562 blood
5 chr6:87879800-87923000 Weak transcription Esophagus oesophagus
6 chr6:87880600-87906000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr6:87881400-87926200 Weak transcription Liver Liver
8 chr6:87881800-87909400 Weak transcription Fetal Brain Male brain
9 chr6:87883400-87926200 Weak transcription Fetal Lung lung
10 chr6:87884000-87906000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
11 chr6:87884000-87964400 Weak transcription NHEK skin
12 chr6:87888200-87964200 Weak transcription HSMMtube muscle
13 chr6:87889800-87926400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
14 chr6:87890200-87905800 Weak transcription Brain Hippocampus Middle brain
15 chr6:87890200-87906000 Weak transcription Brain Cingulate Gyrus brain
16 chr6:87890200-87909400 Weak transcription Brain Substantia Nigra brain
17 chr6:87890800-87909600 Weak transcription Brain Germinal Matrix brain
18 chr6:87890800-87910000 Weak transcription Right Ventricle heart
19 chr6:87890800-87933000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr6:87891000-87920000 Weak transcription Placenta Placenta
21 chr6:87891000-87956000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr6:87891200-87913000 Weak transcription Lung lung
23 chr6:87891200-87929200 Weak transcription Thymus Thymus
24 chr6:87891400-87912800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr6:87891400-87932600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
26 chr6:87892000-87923000 Weak transcription Cortex derived primary cultured neurospheres brain
27 chr6:87892800-87921600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
28 chr6:87893000-87917600 Weak transcription iPS-20b Cell Line embryonic stem cell
29 chr6:87893800-87915600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
30 chr6:87894000-87915600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr6:87894800-87921800 Weak transcription NHDF-Ad bronchial
32 chr6:87894800-87924200 Weak transcription Adipose Nuclei Adipose
33 chr6:87894800-87926200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr6:87895400-87906200 Weak transcription NHLF lung
35 chr6:87895800-87912600 Weak transcription HUES48 Cell Line embryonic stem cell
36 chr6:87895800-87924000 Weak transcription Rectal Mucosa Donor 29 rectum
37 chr6:87896000-87909600 Weak transcription Primary monocytes fromperipheralblood blood
38 chr6:87896000-87932800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr6:87896200-87920200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr6:87896200-87921400 Weak transcription HepG2 liver
41 chr6:87896400-87906000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
42 chr6:87896400-87908400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr6:87896400-87910400 Weak transcription Osteobl bone
44 chr6:87896400-87911800 Weak transcription HUES64 Cell Line embryonic stem cell
45 chr6:87896400-87913000 Weak transcription Fetal Intestine Large intestine
46 chr6:87896400-87915600 Weak transcription Primary B cells from peripheral blood blood
47 chr6:87896400-87925600 Weak transcription Primary hematopoietic stem cells short term culture blood
48 chr6:87896400-87926000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
49 chr6:87896400-87927400 Weak transcription HMEC breast
50 chr6:87896400-87927800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015