The 2.0 version of rSNPBase

Variant report

Variant rs2025630
Chromosome Location chr6:87881267-87881268
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:113 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:87866600-87883600 Weak transcription Right Ventricle heart
2 chr6:87866600-87883600 Weak transcription Skeletal Muscle Male skeletal muscle
3 chr6:87866600-87885400 Enhancers Primary T helper naive cells fromperipheralblood blood
4 chr6:87866600-87886000 Weak transcription Fetal Muscle Trunk muscle
5 chr6:87866600-87886600 Weak transcription Aorta Aorta
6 chr6:87866600-87889800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr6:87866600-87890000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr6:87866600-87890200 Weak transcription Fetal Muscle Leg muscle
9 chr6:87867000-87883400 Weak transcription Fetal Adrenal Gland Adrenal Gland
10 chr6:87867000-87886000 Weak transcription Monocytes-CD14+_RO01746 blood
11 chr6:87867000-87895600 Weak transcription HSMM muscle
12 chr6:87867000-87915600 Weak transcription NH-A brain
13 chr6:87867200-87883200 Weak transcription HMEC breast
14 chr6:87867200-87893400 Weak transcription Adipose Nuclei Adipose
15 chr6:87867400-87881400 Weak transcription Duodenum Mucosa Duodenum
16 chr6:87867800-87883000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr6:87867800-87883400 Weak transcription Primary hematopoietic stem cells blood
18 chr6:87867800-87885800 Weak transcription Fetal Thymus thymus
19 chr6:87867800-87886400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
20 chr6:87868000-87933000 Weak transcription Hela-S3 cervix
21 chr6:87868200-87886000 Weak transcription Thymus Thymus
22 chr6:87868200-87889600 Weak transcription Rectal Mucosa Donor 29 rectum
23 chr6:87868400-87883600 Weak transcription Small Intestine intestine
24 chr6:87868600-87889800 Weak transcription Fetal Intestine Large intestine
25 chr6:87868800-87881400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
26 chr6:87869000-87882800 Weak transcription Primary B cells from cord blood blood
27 chr6:87869000-87885200 Weak transcription Placenta Placenta
28 chr6:87869400-87885800 Enhancers Primary T helper cells fromperipheralblood blood
29 chr6:87869600-87884800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr6:87870000-87882800 Weak transcription Primary hematopoietic stem cells short term culture blood
31 chr6:87871400-87883600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
32 chr6:87871400-87890000 Weak transcription Pancreas Pancrea
33 chr6:87871400-87890200 Weak transcription Gastric stomach
34 chr6:87872800-87883000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
35 chr6:87873400-87883200 Weak transcription Rectal Smooth Muscle rectum
36 chr6:87874000-87883000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr6:87874200-87881400 Weak transcription Fetal Brain Female brain
38 chr6:87874200-87881400 Weak transcription Fetal Lung lung
39 chr6:87874200-87890000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
40 chr6:87874200-87892600 Weak transcription NHDF-Ad bronchial
41 chr6:87874400-87924200 Weak transcription Fetal Kidney kidney
42 chr6:87874600-87890000 Weak transcription Psoas Muscle Psoas
43 chr6:87875000-87881600 Weak transcription Fetal Brain Male brain
44 chr6:87875000-87910400 Weak transcription K562 blood
45 chr6:87875800-87885000 Weak transcription Left Ventricle heart
46 chr6:87876200-87881400 Weak transcription Sigmoid Colon Sigmoid Colon
47 chr6:87876200-87883200 Weak transcription Breast Myoepithelial Primary Cells Breast
48 chr6:87876400-87890200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
49 chr6:87876400-87890600 Weak transcription NHLF lung
50 chr6:87876600-87883200 Weak transcription Skeletal Muscle Female skeletal muscle

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Last update: Aug 31, 2015