The 2.0 version of rSNPBase

Variant report

Variant rs4774234
Chromosome Location chr15:56466252-56466253
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:56442600-56470600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr15:56446600-56468400 Weak transcription Fetal Lung lung
3 chr15:56453000-56479600 Weak transcription Fetal Adrenal Gland Adrenal Gland
4 chr15:56453600-56515000 Weak transcription NHLF lung
5 chr15:56454400-56466400 Weak transcription Duodenum Smooth Muscle Duodenum
6 chr15:56454400-56467000 Weak transcription Brain Angular Gyrus brain
7 chr15:56454400-56467200 Weak transcription Brain Cingulate Gyrus brain
8 chr15:56454400-56470000 Weak transcription Colon Smooth Muscle Colon
9 chr15:56454400-56470200 Weak transcription Brain Inferior Temporal Lobe brain
10 chr15:56454400-56473400 Weak transcription K562 blood
11 chr15:56454600-56484000 Weak transcription Brain Anterior Caudate brain
12 chr15:56456600-56484800 Weak transcription Aorta Aorta
13 chr15:56457200-56469000 Weak transcription Hela-S3 cervix
14 chr15:56457400-56500400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr15:56457800-56471600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr15:56458000-56470200 Weak transcription Placenta Amnion Placenta Amnion
17 chr15:56458000-56474000 Weak transcription Pancreas Pancrea
18 chr15:56458400-56496200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr15:56459200-56466600 Weak transcription HUVEC blood vessel
20 chr15:56459200-56469400 Weak transcription Psoas Muscle Psoas
21 chr15:56459200-56511000 Weak transcription Esophagus oesophagus
22 chr15:56459400-56484400 Weak transcription Spleen Spleen
23 chr15:56459600-56473200 Weak transcription Primary T helper naive cells fromperipheralblood blood
24 chr15:56460200-56480800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
25 chr15:56460600-56467000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr15:56460800-56467600 Weak transcription Brain Hippocampus Middle brain
27 chr15:56461000-56466600 Weak transcription Left Ventricle heart
28 chr15:56461000-56466800 Weak transcription Adipose Nuclei Adipose
29 chr15:56461000-56467000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
30 chr15:56461000-56470200 Strong transcription Dnd41 blood
31 chr15:56461000-56470600 Weak transcription NHDF-Ad bronchial
32 chr15:56461200-56469200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
33 chr15:56461200-56469400 Weak transcription Primary T killer naive cells fromperipheralblood blood
34 chr15:56461400-56466800 Strong transcription Monocytes-CD14+_RO01746 blood
35 chr15:56461400-56482400 Weak transcription Ovary ovary
36 chr15:56461600-56470600 Weak transcription Primary T killer memory cells from peripheral blood blood
37 chr15:56462400-56466400 Strong transcription Fetal Thymus thymus
38 chr15:56462400-56467200 Strong transcription Cortex derived primary cultured neurospheres brain
39 chr15:56462600-56466400 Strong transcription HepG2 liver
40 chr15:56462600-56466800 Strong transcription Fetal Intestine Large intestine
41 chr15:56462600-56467200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr15:56462600-56467200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr15:56462800-56469000 Weak transcription Primary T helper naive cells from peripheral blood blood
44 chr15:56463000-56466800 Strong transcription HUES6 Cell Line embryonic stem cell
45 chr15:56463400-56466800 Strong transcription Breast Myoepithelial Primary Cells Breast
46 chr15:56463400-56466800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
47 chr15:56463400-56468800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
48 chr15:56463600-56496600 Weak transcription NHEK skin
49 chr15:56464000-56484000 Weak transcription Fetal Kidney kidney
50 chr15:56464200-56466400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived

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Last update: Aug 31, 2015