Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs1626575	1.00[YRI][hapmap]
rs1679852	0.92[ASW][hapmap];0.84[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];1.00[YRI][hapmap]
rs1679853	1.00[MEX][hapmap]
rs16986107	0.92[ASW][hapmap];0.84[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];1.00[YRI][hapmap]
rs16986129	1.00[MEX][hapmap]
rs16986149	1.00[MEX][hapmap]
rs16986160	1.00[GIH][hapmap]
rs1738422	1.00[MEX][hapmap]
rs197024	0.85[ASW][hapmap];0.90[LWK][hapmap];1.00[MEX][hapmap];0.94[MKK][hapmap];1.00[YRI][hapmap]
rs197026	1.00[MEX][hapmap]
rs197033	1.00[MEX][hapmap]
rs197035	0.95[YRI][hapmap]
rs197037	0.92[ASW][hapmap];0.90[LWK][hapmap];1.00[MEX][hapmap];0.94[MKK][hapmap];0.91[YRI][hapmap]
rs197038	1.00[YRI][hapmap]
rs197039	0.92[ASW][hapmap];0.90[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.95[YRI][hapmap]
rs197040	1.00[YRI][hapmap]
rs2170263	1.00[YRI][hapmap]
rs4893397	1.00[ASW][hapmap];1.00[GIH][hapmap];0.96[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];1.00[YRI][hapmap]
rs5942686	1.00[YRI][hapmap]
rs966692	1.00[ASW][hapmap];0.93[LWK][hapmap];1.00[MEX][hapmap];0.91[MKK][hapmap];1.00[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv817233	chrX:109693720-110244649	Weak transcription Enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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