Variant report

Variant	rs4926707
Chromosome Location	chr1:56500750-56500751
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 41 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:41)

rs_ID	r²[population]
rs10158150	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1041110	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10749703	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs11206712	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11206713	0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11206731	0.86[EUR][1000 genomes]
rs11206735	0.83[EUR][1000 genomes]
rs1156337	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1156338	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12025982	0.83[EUR][1000 genomes]
rs12041298	0.85[EUR][1000 genomes]
rs12043247	0.80[EUR][1000 genomes]
rs12131359	0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1331855	0.85[EUR][1000 genomes]
rs1331856	0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1412215	0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1416130	0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1547157	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1933625	0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1998715	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs2192106	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2211047	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2404391	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2404393	0.91[EUR][1000 genomes]
rs3992634	0.84[EUR][1000 genomes]
rs4926708	0.81[EUR][1000 genomes]
rs4927290	0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs56845669	0.90[EUR][1000 genomes]
rs61772104	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6588596	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6588597	0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6588600	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6670027	0.85[EUR][1000 genomes]
rs6675451	0.86[EUR][1000 genomes]
rs6675960	0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6677449	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7525207	0.81[AFR][1000 genomes];0.86[EUR][1000 genomes]
rs7534031	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7551693	0.86[EUR][1000 genomes]
rs9436997	0.83[EUR][1000 genomes]
rs973501	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:56485200-56501800	Weak transcription	Aorta	Aorta
2	chr1:56492400-56506400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr1:56496200-56500800	Enhancers	Hela-S3	cervix
4	chr1:56497400-56501800	Weak transcription	Fetal Lung	lung
5	chr1:56498000-56502000	Enhancers	NHDF-Ad	bronchial
6	chr1:56499000-56501000	Enhancers	Ovary	ovary
7	chr1:56499200-56500800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
8	chr1:56499200-56501000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr1:56499200-56501000	Enhancers	Osteobl	bone
10	chr1:56499400-56501200	Enhancers	HSMM	muscle
11	chr1:56499600-56500800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
12	chr1:56499600-56502200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr1:56499600-56522200	Weak transcription	Placenta	Placenta
14	chr1:56499800-56500800	Enhancers	Muscle Satellite Cultured Cells	--
15	chr1:56500200-56501000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
16	chr1:56500200-56501400	Enhancers	HSMMtube	muscle
17	chr1:56500400-56501000	Enhancers	Brain Angular Gyrus	brain
18	chr1:56500400-56501000	Enhancers	Fetal Stomach	stomach
19	chr1:56500400-56501000	Enhancers	Lung	lung
20	chr1:56500400-56501000	Enhancers	Right Atrium	heart
21	chr1:56500400-56501200	Enhancers	Adipose Nuclei	Adipose
22	chr1:56500400-56501200	Enhancers	Right Ventricle	heart
23	chr1:56500400-56502000	Enhancers	Left Ventricle	heart
24	chr1:56500400-56502200	Enhancers	Fetal Muscle Leg	muscle

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