Variant report

Variant	rs11206735
Chromosome Location	chr1:56548886-56548887
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 34 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs10158150	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs10888955	0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11206731	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1149639	0.87[ASN][1000 genomes]
rs1156337	0.80[EUR][1000 genomes]
rs12025982	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12041298	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12043247	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12131359	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1235423	0.81[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs1331855	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1331856	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1412215	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1412217	0.92[ASN][1000 genomes]
rs1547157	0.81[EUR][1000 genomes]
rs1724988	0.86[ASN][1000 genomes]
rs1998715	0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2211047	0.80[EUR][1000 genomes]
rs2404391	0.81[EUR][1000 genomes]
rs2404393	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4926707	0.83[EUR][1000 genomes]
rs4926708	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs56845669	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs61772104	0.81[EUR][1000 genomes]
rs6670027	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6673458	0.84[EUR][1000 genomes]
rs6675451	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7525207	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7534031	0.81[EUR][1000 genomes]
rs7551693	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs778122	0.86[ASN][1000 genomes]
rs778127	0.92[ASN][1000 genomes]
rs9436997	0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs973501	0.81[EUR][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:56540200-56549600	Weak transcription	Left Ventricle	heart
2	chr1:56543000-56550000	Weak transcription	Psoas Muscle	Psoas
3	chr1:56548200-56549000	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr1:56548800-56558600	Weak transcription	NHDF-Ad	bronchial

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links