Variant report

Variant	rs1412217
Chromosome Location	chr1:56579583-56579584
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:56579196..56581515-chr1:56583742..56586651,2	K562	blood:

Extended variants
information (count: 38 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:38)

rs_ID	r²[population]
rs10158150	0.86[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs10888955	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11206731	0.81[AFR][1000 genomes];0.90[ASN][1000 genomes]
rs11206735	0.92[ASN][1000 genomes]
rs1149639	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1149641	0.82[AMR][1000 genomes]
rs1149647	0.87[AMR][1000 genomes]
rs12025982	0.92[ASN][1000 genomes]
rs12041298	0.83[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs12043247	0.90[ASN][1000 genomes]
rs12131359	0.81[AFR][1000 genomes]
rs1230037	0.81[AMR][1000 genomes]
rs1235423	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1236961	0.86[AMR][1000 genomes]
rs1331855	0.92[ASN][1000 genomes]
rs1331856	0.81[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs1412215	0.82[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs1724988	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1935050	0.86[CEU][hapmap]
rs6670027	0.82[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs6675451	0.80[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs697583	0.87[AMR][1000 genomes]
rs706375	0.86[AMR][1000 genomes]
rs706376	0.89[CEU][hapmap];0.87[AMR][1000 genomes]
rs706383	0.87[AMR][1000 genomes]
rs706395	0.87[AMR][1000 genomes]
rs7551693	0.91[ASN][1000 genomes]
rs778120	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs778122	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs778127	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs778382	0.86[AMR][1000 genomes]
rs778397	0.83[AMR][1000 genomes]
rs778425	0.87[AMR][1000 genomes]
rs778426	0.86[AMR][1000 genomes]
rs778428	0.87[AMR][1000 genomes]
rs778430	0.87[AMR][1000 genomes]
rs778431	0.87[AMR][1000 genomes]
rs947008	0.86[CEU][hapmap]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:56578400-56580000	Enhancers	Adipose Nuclei	Adipose
2	chr1:56578400-56580200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr1:56578600-56579600	Weak transcription	HepG2	liver

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