The 2.0 version of rSNPBase

Variant report

Variant rs11206731
Chromosome Location chr1:56528099-56528100
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:29 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:56518200-56540000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:56521400-56534600 Weak transcription Psoas Muscle Psoas
3 chr1:56522800-56529200 Weak transcription HSMMtube muscle
4 chr1:56522800-56529400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr1:56522800-56529800 Weak transcription Osteobl bone
6 chr1:56523000-56529200 Weak transcription HSMM muscle
7 chr1:56524200-56528200 Weak transcription Adipose Nuclei Adipose
8 chr1:56524400-56528200 Weak transcription Right Atrium heart
9 chr1:56525600-56530400 Enhancers Placenta Placenta
10 chr1:56526000-56531200 Weak transcription Ovary ovary
11 chr1:56526200-56532000 Weak transcription Aorta Aorta
12 chr1:56526600-56529800 Weak transcription Esophagus oesophagus
13 chr1:56526800-56529200 Weak transcription Fetal Muscle Leg muscle
14 chr1:56526800-56529200 Weak transcription NHDF-Ad bronchial
15 chr1:56526800-56529200 Weak transcription NHLF lung
16 chr1:56526800-56529800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr1:56526800-56533800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr1:56527000-56529800 Weak transcription Muscle Satellite Cultured Cells --
19 chr1:56527200-56528200 Enhancers GM12878-XiMat blood
20 chr1:56527200-56530600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr1:56527400-56528400 Enhancers Fetal Stomach stomach
22 chr1:56527400-56528600 Enhancers NHEK skin
23 chr1:56527600-56531800 Enhancers HMEC breast
24 chr1:56527800-56528600 Enhancers Placenta Amnion Placenta Amnion
25 chr1:56527800-56529000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr1:56527800-56529600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr1:56528000-56529000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr1:56528000-56529800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr1:56528000-56531800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015