Variant report
| Variant | rs55741945 |
|---|---|
| Chromosome Location | chr6:131313359-131313360 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:131298800-131314800 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 2 | chr6:131300400-131314600 | Weak transcription | Small Intestine | intestine |
| 3 | chr6:131303800-131315400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 4 | chr6:131304200-131313400 | Weak transcription | K562 | blood |
| 5 | chr6:131306800-131313800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 6 | chr6:131306800-131313800 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 7 | chr6:131306800-131315200 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 8 | chr6:131306800-131317000 | Weak transcription | Fetal Intestine Small | intestine |
| 9 | chr6:131306800-131317200 | Weak transcription | NHLF | lung |
| 10 | chr6:131306800-131317400 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 11 | chr6:131306800-131320000 | Weak transcription | Left Ventricle | heart |
| 12 | chr6:131308000-131315400 | Weak transcription | Lung | lung |
| 13 | chr6:131308600-131314400 | Weak transcription | Dnd41 | blood |
| 14 | chr6:131309200-131317200 | Weak transcription | Adipose Nuclei | Adipose |
| 15 | chr6:131310400-131316800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 16 | chr6:131311200-131313400 | Weak transcription | HepG2 | liver |
| 17 | chr6:131311400-131318400 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 18 | chr6:131312200-131313600 | Enhancers | Fetal Lung | lung |
| 19 | chr6:131312200-131314000 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
| 20 | chr6:131312400-131313400 | Enhancers | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 21 | chr6:131312400-131313800 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 22 | chr6:131312400-131314000 | Weak transcription | Pancreas | Pancrea |
| 23 | chr6:131312400-131314600 | Weak transcription | Right Atrium | heart |
| 24 | chr6:131312400-131317000 | Weak transcription | Rectal Smooth Muscle | rectum |
| 25 | chr6:131312400-131318400 | Weak transcription | Fetal Muscle Leg | muscle |
| 26 | chr6:131312600-131313600 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 27 | chr6:131312600-131313600 | Enhancers | Osteobl | bone |
| 28 | chr6:131312600-131314000 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 29 | chr6:131312600-131314800 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 30 | chr6:131312600-131314800 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 31 | chr6:131312600-131317400 | Weak transcription | Fetal Stomach | stomach |
| 32 | chr6:131312600-131321800 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 33 | chr6:131313000-131314000 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 34 | chr6:131313000-131318400 | Weak transcription | Fetal Kidney | kidney |
| 35 | chr6:131313200-131315400 | Enhancers | A549 | lung |
| 36 | chr6:131313200-131317000 | Weak transcription | Brain Hippocampus Middle | brain |
