Variant report
| Variant | rs1977577 |
|---|---|
| Chromosome Location | chr6:131306608-131306609 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:131298800-131314800 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 2 | chr6:131299000-131309800 | Weak transcription | HepG2 | liver |
| 3 | chr6:131300400-131312200 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 4 | chr6:131300400-131314600 | Weak transcription | Small Intestine | intestine |
| 5 | chr6:131303800-131315400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 6 | chr6:131304000-131312600 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 7 | chr6:131304200-131313400 | Weak transcription | K562 | blood |
| 8 | chr6:131304400-131312200 | Weak transcription | Fetal Stomach | stomach |
| 9 | chr6:131305600-131307000 | ZNF genes & repeats | GM12878-XiMat | blood |
| 10 | chr6:131305800-131306800 | ZNF genes & repeats | Primary B cells from peripheral blood | blood |
| 11 | chr6:131305800-131309600 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 12 | chr6:131306200-131306800 | ZNF genes & repeats | Breast Myoepithelial Primary Cells | Breast |
| 13 | chr6:131306200-131306800 | ZNF genes & repeats | Fetal Intestine Small | intestine |
| 14 | chr6:131306200-131306800 | ZNF genes & repeats | Fetal Muscle Leg | muscle |
| 15 | chr6:131306200-131306800 | ZNF genes & repeats | Thymus | Thymus |
| 16 | chr6:131306200-131306800 | ZNF genes & repeats | NHLF | lung |
| 17 | chr6:131306200-131307200 | ZNF genes & repeats | Dnd41 | blood |
| 18 | chr6:131306400-131306800 | Genic enhancers | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 19 | chr6:131306400-131306800 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
| 20 | chr6:131306400-131306800 | ZNF genes & repeats | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 21 | chr6:131306400-131307000 | ZNF genes & repeats | HUES64 Cell Line | embryonic stem cell |
| 22 | chr6:131306600-131306800 | ZNF genes & repeats | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 23 | chr6:131306600-131306800 | ZNF genes & repeats | IMR90 fetal lung fibroblasts Cell Line | lung |
| 24 | chr6:131306600-131306800 | ZNF genes & repeats | Primary hematopoietic stem cells short term culture | blood |
| 25 | chr6:131306600-131306800 | ZNF genes & repeats | Brain Substantia Nigra | brain |
| 26 | chr6:131306600-131306800 | Enhancers | Left Ventricle | heart |
| 27 | chr6:131306600-131306800 | Enhancers | Pancreas | Pancrea |
| 28 | chr6:131306600-131307400 | Enhancers | Colon Smooth Muscle | Colon |
