The 2.0 version of rSNPBase

Variant report

Variant rs60446197
Chromosome Location chr6:131285318-131285319
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:131253000-131302200 Weak transcription Primary B cells from cord blood blood
2 chr6:131255400-131288800 Weak transcription Fetal Kidney kidney
3 chr6:131260000-131286200 Weak transcription HSMMtube muscle
4 chr6:131266000-131287600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr6:131266800-131287200 Weak transcription H9 Cell Line embryonic stem cell
6 chr6:131267000-131286000 Weak transcription Brain Angular Gyrus brain
7 chr6:131267000-131294800 Weak transcription H1 Cell Line embryonic stem cell
8 chr6:131267400-131286000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr6:131267400-131287200 Weak transcription HUES48 Cell Line embryonic stem cell
10 chr6:131267600-131287200 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr6:131267800-131286000 Weak transcription NHDF-Ad bronchial
12 chr6:131267800-131288200 Weak transcription NH-A brain
13 chr6:131268400-131287200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
14 chr6:131269000-131290400 Weak transcription Right Ventricle heart
15 chr6:131269400-131286000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr6:131272200-131301000 Weak transcription Placenta Placenta
17 chr6:131272800-131289000 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr6:131274400-131289000 Weak transcription Rectal Smooth Muscle rectum
19 chr6:131275800-131287800 Weak transcription Fetal Stomach stomach
20 chr6:131276200-131286000 Weak transcription Primary hematopoietic stem cells blood
21 chr6:131276400-131286800 Weak transcription Aorta Aorta
22 chr6:131276400-131288800 Weak transcription Rectal Mucosa Donor 29 rectum
23 chr6:131277000-131286000 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr6:131277000-131288600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr6:131277400-131290000 Weak transcription Fetal Intestine Small intestine
26 chr6:131277600-131286400 Weak transcription NHLF lung
27 chr6:131277600-131287800 Weak transcription Fetal Muscle Leg muscle
28 chr6:131277600-131288800 Weak transcription Fetal Muscle Trunk muscle
29 chr6:131277800-131287800 Weak transcription Sigmoid Colon Sigmoid Colon
30 chr6:131280000-131288200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
31 chr6:131280200-131286000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr6:131280200-131286200 Weak transcription Osteobl bone
33 chr6:131280400-131285800 Weak transcription Muscle Satellite Cultured Cells --
34 chr6:131280400-131286200 Weak transcription HSMM muscle
35 chr6:131281400-131286000 Weak transcription Breast Myoepithelial Primary Cells Breast
36 chr6:131281400-131287200 Weak transcription Ovary ovary
37 chr6:131281800-131286000 Weak transcription Brain Anterior Caudate brain
38 chr6:131281800-131288000 Weak transcription Fetal Adrenal Gland Adrenal Gland
39 chr6:131282000-131287000 Weak transcription HepG2 liver
40 chr6:131282000-131287600 Weak transcription Brain Substantia Nigra brain
41 chr6:131282200-131286000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr6:131282600-131285400 Weak transcription Fetal Lung lung
43 chr6:131282600-131288000 Weak transcription Brain Inferior Temporal Lobe brain
44 chr6:131283000-131286000 Weak transcription Small Intestine intestine
45 chr6:131283800-131287000 Enhancers Primary B cells from peripheral blood blood
46 chr6:131284200-131285800 Enhancers GM12878-XiMat blood
47 chr6:131284200-131286000 Weak transcription Adipose Nuclei Adipose
48 chr6:131284200-131286000 Weak transcription Psoas Muscle Psoas
49 chr6:131284200-131287400 Weak transcription Brain Cingulate Gyrus brain
50 chr6:131284400-131287000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015