The 2.0 version of rSNPBase

Variant report

Variant rs56009627
Chromosome Location chr6:131277659-131277660
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:131220600-131281200 Weak transcription Fetal Adrenal Gland Adrenal Gland
2 chr6:131244200-131279000 Weak transcription Primary hematopoietic stem cells short term culture blood
3 chr6:131253000-131302200 Weak transcription Primary B cells from cord blood blood
4 chr6:131255400-131288800 Weak transcription Fetal Kidney kidney
5 chr6:131256000-131279400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr6:131257400-131281800 Weak transcription Colon Smooth Muscle Colon
7 chr6:131260000-131286200 Weak transcription HSMMtube muscle
8 chr6:131264800-131277800 Weak transcription Gastric stomach
9 chr6:131266000-131280600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr6:131266000-131283800 Weak transcription Lung lung
11 chr6:131266000-131287600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
12 chr6:131266800-131287200 Weak transcription H9 Cell Line embryonic stem cell
13 chr6:131267000-131286000 Weak transcription Brain Angular Gyrus brain
14 chr6:131267000-131294800 Weak transcription H1 Cell Line embryonic stem cell
15 chr6:131267200-131281200 Weak transcription Brain Inferior Temporal Lobe brain
16 chr6:131267200-131282200 Weak transcription Primary B cells from peripheral blood blood
17 chr6:131267400-131279600 Weak transcription HMEC breast
18 chr6:131267400-131280200 Weak transcription Brain Anterior Caudate brain
19 chr6:131267400-131281600 Weak transcription GM12878-XiMat blood
20 chr6:131267400-131286000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr6:131267400-131287200 Weak transcription HUES48 Cell Line embryonic stem cell
22 chr6:131267600-131284000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr6:131267600-131287200 Weak transcription ES-I3 Cell Line embryonic stem cell
24 chr6:131267800-131286000 Weak transcription NHDF-Ad bronchial
25 chr6:131267800-131288200 Weak transcription NH-A brain
26 chr6:131268200-131279400 Weak transcription Muscle Satellite Cultured Cells --
27 chr6:131268400-131279800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
28 chr6:131268400-131280600 Weak transcription Brain Hippocampus Middle brain
29 chr6:131268400-131287200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
30 chr6:131269000-131290400 Weak transcription Right Ventricle heart
31 chr6:131269400-131286000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr6:131271000-131279200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr6:131271400-131279600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
34 chr6:131272200-131301000 Weak transcription Placenta Placenta
35 chr6:131272400-131281800 Weak transcription Fetal Thymus thymus
36 chr6:131272800-131277800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr6:131272800-131289000 Weak transcription Skeletal Muscle Female skeletal muscle
38 chr6:131274400-131289000 Weak transcription Rectal Smooth Muscle rectum
39 chr6:131274600-131279200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
40 chr6:131274800-131279000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr6:131275000-131281200 Weak transcription Ovary ovary
42 chr6:131275200-131279600 Weak transcription Osteobl bone
43 chr6:131275800-131287800 Weak transcription Fetal Stomach stomach
44 chr6:131276200-131286000 Weak transcription Primary hematopoietic stem cells blood
45 chr6:131276400-131279000 Weak transcription Dnd41 blood
46 chr6:131276400-131279200 Weak transcription Breast Myoepithelial Primary Cells Breast
47 chr6:131276400-131283000 Weak transcription Adipose Nuclei Adipose
48 chr6:131276400-131284000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
49 chr6:131276400-131286800 Weak transcription Aorta Aorta
50 chr6:131276400-131288800 Weak transcription Rectal Mucosa Donor 29 rectum

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Last update: Aug 31, 2015