The 2.0 version of rSNPBase

Variant report

Variant rs57348988
Chromosome Location chr10:61589539-61589540
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:61567000-61593600 Weak transcription Small Intestine intestine
2 chr10:61571000-61591200 Weak transcription NHEK skin
3 chr10:61571400-61628000 Weak transcription Spleen Spleen
4 chr10:61571600-61595800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr10:61571600-61598400 Weak transcription Fetal Brain Female brain
6 chr10:61571600-61609200 Weak transcription NHLF lung
7 chr10:61571600-61616000 Weak transcription Fetal Kidney kidney
8 chr10:61572000-61615000 Weak transcription Colonic Mucosa Colon
9 chr10:61572400-61591200 Weak transcription Hela-S3 cervix
10 chr10:61572400-61618800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr10:61572800-61591200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
12 chr10:61572800-61591200 Weak transcription Stomach Smooth Muscle stomach
13 chr10:61573000-61598400 Weak transcription Placenta Amnion Placenta Amnion
14 chr10:61576600-61594400 Weak transcription Fetal Heart heart
15 chr10:61578000-61590600 Weak transcription HUES6 Cell Line embryonic stem cell
16 chr10:61578000-61590600 Weak transcription NH-A brain
17 chr10:61578000-61590800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr10:61578000-61591400 Weak transcription Rectal Smooth Muscle rectum
19 chr10:61578000-61623200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
20 chr10:61578200-61589600 Weak transcription Brain Angular Gyrus brain
21 chr10:61578200-61590400 Weak transcription Osteobl bone
22 chr10:61578200-61590600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr10:61578200-61591200 Weak transcription H9 Cell Line embryonic stem cell
24 chr10:61578200-61591400 Weak transcription Esophagus oesophagus
25 chr10:61578200-61595400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr10:61578200-61597800 Weak transcription HSMMtube muscle
27 chr10:61578400-61591200 Weak transcription HSMM muscle
28 chr10:61578400-61603400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
29 chr10:61579600-61591000 Weak transcription Primary T killer naive cells fromperipheralblood blood
30 chr10:61579600-61591800 Weak transcription HUVEC blood vessel
31 chr10:61579800-61595200 Weak transcription ES-I3 Cell Line embryonic stem cell
32 chr10:61580000-61590600 Weak transcription Brain Germinal Matrix brain
33 chr10:61580000-61595200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
34 chr10:61580200-61591200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
35 chr10:61580200-61603200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
36 chr10:61580200-61605600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
37 chr10:61580200-61624200 Weak transcription Primary T killer memory cells from peripheral blood blood
38 chr10:61580400-61591000 Weak transcription Primary T helper naive cells fromperipheralblood blood
39 chr10:61580400-61624200 Weak transcription Primary T helper naive cells from peripheral blood blood
40 chr10:61580600-61616200 Weak transcription Fetal Brain Male brain
41 chr10:61581000-61598000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
42 chr10:61581400-61589800 Weak transcription Primary T helper cells PMA-I stimulated --
43 chr10:61581400-61597800 Weak transcription Brain Substantia Nigra brain
44 chr10:61583000-61591800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr10:61583200-61590600 Weak transcription Fetal Intestine Small intestine
46 chr10:61583200-61595400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
47 chr10:61583200-61606600 Weak transcription Pancreas Pancrea
48 chr10:61583200-61640600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
49 chr10:61583400-61592600 Strong transcription Dnd41 blood
50 chr10:61584000-61591800 Strong transcription Primary T cells from cord blood blood

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Last update: Aug 31, 2015