The 2.0 version of rSNPBase

Variant report

Variant rs10994027
Chromosome Location chr10:61577738-61577739
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:61537600-61582800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr10:61549600-61579600 Strong transcription Primary B cells from cord blood blood
3 chr10:61556000-61583800 Strong transcription Primary B cells from peripheral blood blood
4 chr10:61565400-61586600 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr10:61567000-61593600 Weak transcription Small Intestine intestine
6 chr10:61567600-61579200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
7 chr10:61568200-61582400 Weak transcription Psoas Muscle Psoas
8 chr10:61571000-61591200 Weak transcription NHEK skin
9 chr10:61571400-61579000 Weak transcription Brain Germinal Matrix brain
10 chr10:61571400-61628000 Weak transcription Spleen Spleen
11 chr10:61571600-61577800 Weak transcription Aorta Aorta
12 chr10:61571600-61577800 Weak transcription Thymus Thymus
13 chr10:61571600-61579200 Weak transcription Fetal Brain Male brain
14 chr10:61571600-61579400 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr10:61571600-61579400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr10:61571600-61579800 Weak transcription Brain Substantia Nigra brain
17 chr10:61571600-61580600 Weak transcription Colon Smooth Muscle Colon
18 chr10:61571600-61580800 Weak transcription Brain Cingulate Gyrus brain
19 chr10:61571600-61582800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
20 chr10:61571600-61583600 Weak transcription GM12878-XiMat blood
21 chr10:61571600-61585400 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr10:61571600-61585800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
23 chr10:61571600-61585800 Weak transcription Lung lung
24 chr10:61571600-61585800 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr10:61571600-61595800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
26 chr10:61571600-61598400 Weak transcription Fetal Brain Female brain
27 chr10:61571600-61609200 Weak transcription NHLF lung
28 chr10:61571600-61616000 Weak transcription Fetal Kidney kidney
29 chr10:61571800-61583000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr10:61572000-61615000 Weak transcription Colonic Mucosa Colon
31 chr10:61572200-61585200 Weak transcription iPS-15b Cell Line embryonic stem cell
32 chr10:61572400-61579200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr10:61572400-61579400 Weak transcription Primary T killer memory cells from peripheral blood blood
34 chr10:61572400-61589200 Weak transcription K562 blood
35 chr10:61572400-61591200 Weak transcription Hela-S3 cervix
36 chr10:61572400-61618800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr10:61572600-61579000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
38 chr10:61572600-61579200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
39 chr10:61572600-61583600 Weak transcription Brain Hippocampus Middle brain
40 chr10:61572600-61584200 Weak transcription Fetal Lung lung
41 chr10:61572800-61578800 Weak transcription Primary T helper naive cells from peripheral blood blood
42 chr10:61572800-61579000 Weak transcription Primary T killer naive cells fromperipheralblood blood
43 chr10:61572800-61591200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
44 chr10:61572800-61591200 Weak transcription Stomach Smooth Muscle stomach
45 chr10:61573000-61579000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
46 chr10:61573000-61598400 Weak transcription Placenta Amnion Placenta Amnion
47 chr10:61573200-61582000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
48 chr10:61573400-61585600 Weak transcription Adipose Nuclei Adipose
49 chr10:61573600-61581400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr10:61573800-61579000 Weak transcription Cortex derived primary cultured neurospheres brain

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Last update: Aug 31, 2015