The 2.0 version of rSNPBase

Variant report

Variant rs58299475
Chromosome Location chr12:26216234-26216235
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:26192400-26228600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr12:26196400-26219800 Weak transcription Fetal Kidney kidney
3 chr12:26197200-26228600 Weak transcription Aorta Aorta
4 chr12:26199200-26220200 Weak transcription Brain Substantia Nigra brain
5 chr12:26199400-26221600 Weak transcription Brain Cingulate Gyrus brain
6 chr12:26200800-26229000 Weak transcription Fetal Muscle Trunk muscle
7 chr12:26201000-26220800 Weak transcription Left Ventricle heart
8 chr12:26201000-26223400 Weak transcription Fetal Muscle Leg muscle
9 chr12:26201200-26234600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr12:26201400-26221600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr12:26201600-26236200 Weak transcription Right Ventricle heart
12 chr12:26206800-26229600 Weak transcription Ovary ovary
13 chr12:26206800-26229800 Weak transcription Stomach Smooth Muscle stomach
14 chr12:26207000-26218000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr12:26207000-26221400 Weak transcription Fetal Stomach stomach
16 chr12:26207200-26220400 Weak transcription Brain Hippocampus Middle brain
17 chr12:26207400-26223600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
18 chr12:26207600-26217400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr12:26207600-26221200 Weak transcription Pancreas Pancrea
20 chr12:26207800-26221400 Weak transcription HUES48 Cell Line embryonic stem cell
21 chr12:26207800-26221400 Weak transcription HUES64 Cell Line embryonic stem cell
22 chr12:26207800-26224000 Weak transcription ES-I3 Cell Line embryonic stem cell
23 chr12:26207800-26224000 Weak transcription HUES6 Cell Line embryonic stem cell
24 chr12:26208000-26221000 Weak transcription iPS-18 Cell Line embryonic stem cell
25 chr12:26208400-26234600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr12:26209000-26220400 Weak transcription Lung lung
27 chr12:26209600-26220200 Weak transcription Brain Inferior Temporal Lobe brain
28 chr12:26209600-26220600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr12:26209600-26224800 Weak transcription Brain Anterior Caudate brain
30 chr12:26209600-26230400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
31 chr12:26209800-26220400 Weak transcription Fetal Intestine Small intestine
32 chr12:26211400-26227400 Weak transcription Placenta Placenta
33 chr12:26211600-26220200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
34 chr12:26211600-26223800 Weak transcription Fetal Intestine Large intestine
35 chr12:26211600-26234600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
36 chr12:26211800-26217800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr12:26211800-26230800 Weak transcription Fetal Lung lung
38 chr12:26212000-26216400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
39 chr12:26212000-26217800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr12:26212200-26223400 Weak transcription Colon Smooth Muscle Colon
41 chr12:26214400-26224800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
42 chr12:26215200-26230200 Weak transcription Adipose Nuclei Adipose
43 chr12:26215600-26217600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
44 chr12:26215600-26222600 Weak transcription ES-WA7 Cell Line embryonic stem cell
45 chr12:26215800-26218200 Weak transcription Breast Myoepithelial Primary Cells Breast
46 chr12:26215800-26220800 Weak transcription HUVEC blood vessel
47 chr12:26215800-26221400 Weak transcription H9 Cell Line embryonic stem cell
48 chr12:26215800-26221600 Weak transcription Duodenum Smooth Muscle Duodenum
49 chr12:26215800-26230800 Weak transcription A549 lung
50 chr12:26216000-26217000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015