Variant report

Variant	rs60933829
Chromosome Location	chr10:44147688-44147689
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:44142963..44146029-chr10:44146133..44149258,3	K562	blood:

Variant related genes	Relation type
ENSG00000169740	Chromatin interaction

Extended variants
information (count: 28 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10450466	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11238621	0.92[ASN][1000 genomes]
rs17154089	0.83[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17154099	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17154103	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17154107	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17154117	1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17154131	0.81[ASN][1000 genomes]
rs3123663	0.83[ASN][1000 genomes]
rs3128252	0.81[ASN][1000 genomes]
rs3814562	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4491169	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4614394	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs57182212	0.90[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs57408979	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs57969344	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs58593574	1.00[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs58757312	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs60643875	1.00[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs61697162	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs73260785	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs73262706	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs73264454	0.83[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs73264491	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs73266505	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7893286	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7907742	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs878478	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44145000-44149000	Weak transcription	NHDF-Ad	bronchial
2	chr10:44145000-44149000	Weak transcription	Osteobl	bone
3	chr10:44145000-44149200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr10:44145000-44149200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
5	chr10:44145000-44153600	Weak transcription	Fetal Stomach	stomach
6	chr10:44145200-44148600	Weak transcription	Fetal Heart	heart
7	chr10:44145200-44148800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
8	chr10:44145200-44149000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
9	chr10:44145200-44149000	Weak transcription	Muscle Satellite Cultured Cells	--
10	chr10:44145400-44148800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
11	chr10:44145600-44149200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
12	chr10:44145600-44149200	Weak transcription	Fetal Kidney	kidney

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